dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0054097
Uniprot Accession W6RTE4; W6RTE4_CAEEL;
Genbank Protein ID NP_001294151.1;
Genbank Nucleotide ID NM_001307222.1;
Protein Name NOT-Like (Yeast CCR4/NOT complex component)
Protein Synonyms/Alias
Gene Name ntl-4
Gene Synonyms/Alias C49H3.5;CELE_C49H3.5;
Organism Caenorhabditis elegans
NCBI Taxa ID 6239
Functional Description
(View all)
Phosphorylation Sites
 dbPAF PTMs: 4
PositionPeptidesSourceReferences ( PMIDs )
269DKILAPTSNSPRRYLPhospho.ELM 9.0;PHOSIDA;curated19530675; 21081558; 18806794
271ILAPTSNSPRRYLEDPhospho.ELM 9.0;PHOSIDA;PhosphoPep 2.0;curated19530675; 21081558; 19060867; 18806794
470PSFRREASPPPGLARPhospho.ELM 9.0;PHOSIDA;PhosphoPep 2.0;curated19530675; 21081558; 19060867; 18806794
480PGLARFNSDDDLGFDPhospho.ELM 9.0;PHOSIDA;PhosphoPep 2.0;curated19530675; 21081558; 19060867; 18806794
Sequence
(Fasta)		MSTCSDESCD KECPLCMETL ELDDINFYPC KCEYQICRFC WHRIRTDENG LCPACRQPYP 60
EDPVNFKPMT TDDVRKHKDE QRLKKQAEKL KLSDARQYLC NYRVLQKNLV YVVGLSPRVA 120
DPEILKKNEY FGRYGKIQKI VTSATPSLPA PHLPPSHTAY VTYKRVDDAL RAIQGVHNSM 180
LDGRLVKASL GTTKYCSSFL NSRKCFKPVG ECMYLHENAE AEISFTKDDM HLGKHTEYEK 240
RLIESMNSRP PPPQSTLASQ LDKILAPTSN SPRRYLEDDS DTVDDVERTG SAIHMCADDP 300
DDDDADSTNT SNSIDDPAPS NPADETVNSR RSNQTARERQ WSERDEISVA PSNTPPTDPE 360
GNENEFEEDI HRNDVSDLMS KLDVNDDRLA RTSFSENDYL GIPAPAKHQE APAPLMQWEA 420
LLGLSSPSAQ STIVEPSSLF PTFKMDSGFN SQSLFGTHTS STPSFRREAS PPPGLARFNS 480
DDDLGFDPFT ESSKGLSALL QEEQEQIPPH NSASNHTLDV LKHSRLFGQL PEQRQSTQQH 540
PQHLQSSHQQ HPLQQNQDQH HSFLHQLHAQ QQHQQQQFAA DMNRQQDYMY SRLMSQQQQQ 600
SQQQRQFDST PGFSHPFGSM QQQQQSSQQQ QHQSQSSQSS SLLQDLFNRQ QQQHQAQQQA 660
QQHQQQQMYA GINSYMYNDM LMPRVPFGMA PPPGLGGPST NRSSTTQQAP PHMTQQSQQQ 720
QQQQQSSMGL FGMGGHQSMM QDHQSQQPQS AQDAFKALLP NVNVRFMDDN SMSRWSHENS 780
LRSSAVPPPP GFSSVMNR 799
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR003954--RRM_dom_euk
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50102--RRM
PS50089--ZF_RING_2
Pfam

PF00076--RRM_1
Gene Ontology

GO:0030014--C:CCR4-NOT complex
GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0000288--P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0016567--P:protein ubiquitination