dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0054059
Uniprot Accession U4PCM1; U4PCM1_CAEEL;
Genbank Protein ID NP_001293597.1;
Genbank Nucleotide ID NM_001306668.1;
Protein Name Polyadenylation Factor Subunit homolog
Protein Synonyms/Alias
Gene Name pfs-2
Gene Synonyms/Alias CELE_R06A4.9;R06A4.9;
Organism Caenorhabditis elegans
NCBI Taxa ID 6239
Functional Description
(View all)
Phosphorylation Sites
dbPAF PTMs: 1
PositionPeptidesSourceReferences ( PMIDs )
765SGRSDQLSPSGPPPQPhosphoPep 2.019060867
Sequence
(Fasta)
MTAVSNIASF NMNGGMMRGN QMPNVTLTIQ PSTSSMQNSQ PRIMNNHHHP HNRFQREHVM 60
PDVMGDGPGR RLRKNVANVR RHVDYVSTVL NHCENRLWQY GKQRILQQPD ILYQQYAVPA 120
DSTPDVPVDC ILTKFIRTAM NKVKCPVYSV CWSPEGKRLI TGCQTGEFTL WNGTAFNFET 180
ILQAHDSAIR ALKWASNEQW LLSADQGGYV KYWQPNMNNA HMFSAHKDEA IRGLAFAPTD 240
VKFATASDDG TARVWDFARY TEERVLRGHG AEVRCIDWHP TKGLIATGSR DTQQPVKIWD 300
PKSGSCLATL QEHKSSVMAV EFNKNGNWLL TGGRDHLVKM YDIRMMKEMR TYRAHKKEVI 360
SLAWHPIHEG LFVSGGGDGS IVYWMVDGEK EIGLLEHAHD QAIWSMKWHP LGHILATGSN 420
DNNTKFWARN RPGDTVEDIF GLSNTNMIGH LDKEREPRMA PPKPSIETQE TYRPDTFIPG 480
MGLDEHLYEQ LNRDHNMMTT DSTLLVPDDL TRQNFAPMIG AKRTLIKQPP AKKAQRQFER 540
MWNNSKGIGA GSDDFTTMKG GLGREDAEGA QFGPSKSFLG PPTTGGSLLG PSQPRPQEFR 600
SVPPPQQQQG PPPNWRHQGP PMSGPGQGYG PPGRMGGNQG GWQRPPPQGS YGGQGPPQGS 660
YGGQGTLQGS YASQQGPPPR QIQHIPSDID YRTAPSSSNG STGDVDMRTM VPNQPPSGEP 720
EHWRGPPPVS HQQQSQQQHP PPINMQRMDP RRDPRMLSGR SDQLSPSGPP PQQQQSSAQQ 780
GGKNQWMPQF EAGQNQNQGN YAGNRGGGVG GRGRGRGQPY 821
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

Gene Ontology

GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0016607--C:nuclear speck
GO:0006379--P:mRNA cleavage
GO:0006378--P:mRNA polyadenylation