dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0053754
Uniprot Accession M0R7B4; M0R7B4_RAT;
Genbank Protein ID XP_001072089.1; XP_008769903.1;
Genbank Nucleotide ID XM_001072089.5; XM_008771681.1;
Protein Name Protein LOC684828
Protein Synonyms/Alias
Gene Name LOC684828
Gene Synonyms/Alias rCG_45259;
Organism Rattus norvegicus(Rat)
NCBI Taxa ID 10116
Functional Description
(View all)
Phosphorylation Sites
 dbPAF PTMs: 3
PositionPeptidesSourceReferences ( PMIDs )
18APAPVEKTPVKKKAKPhosphoSitePlus;curated22135298; 23712012; 21630457; 23984901
37AAGKRKASGPPVSELPhosphoSitePlus22135298
173GAKKVSKSPKKVKAAcurated21630457
Sequence
(Fasta)		MSETAPAAPA APAPVEKTPV KKKAKKTSSA AGKRKASGPP VSELITKAVA ASKERSGVSL 60
AALKKALAAA GYDVEKNNSR IKLGLKSLVS KGILVQTKGT GASGSFKLNK KASSGEAKPK 120
AKKVGAAKAK KPAGSAKKPK KATGSATPRK TKKTPKKAKK PGATAGAKKV SKSPKKVKAA 180
KPKKAAKSPA KAKAPKAKAT KPKASKPKAN KAKKAAPRKK 221
Keyword

KW-0158--Chromosome
KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR005818--Histone_H1/H5_H15
IPR005819--Histone_H5
IPR011991--WHTH_DNA-bd_dom
PROSITE

PS51504--H15
Pfam

PF00538--Linker_histone
Gene Ontology

GO:0005719--C:nuclear euchromatin
GO:0000786--C:nucleosome
GO:0031490--F:chromatin DNA binding
GO:0044822--F:poly(A) RNA binding
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006334--P:nucleosome assembly
GO:0016584--P:nucleosome positioning