dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0053355
Uniprot Accession I6L9G6; I6L9G6_RAT;
Genbank Protein ID NP_001011979.1;
Genbank Nucleotide ID NM_001011979.2;
Protein Name Protein Tardbp
Protein Synonyms/Alias
Gene Name Tardbp
Gene Synonyms/Alias rCG_31562;
Organism Rattus norvegicus(Rat)
NCBI Taxa ID 10116
Functional Description
(View all)
Phosphorylation Sites
 dbPAF PTMs: 6
PositionPeptidesSourceReferences ( PMIDs )
73AGWGNLVYVVNYPKDPhosphoSitePlus22135298
115VLGLPWKTTEQDLKDcurated23984901
183KLPNSKQSPDEPLRSPhosphoSitePlus;curated22135298; 23712012; 21630457; 23984901
233FRAFAFVTFADDKVAcurated23984901
242ADDKVAQSLCGEDLIcurated23984901
254DLIIKGISVHISNAEcurated23984901
Sequence
(Fasta)		MSEYIRVTED ENDEPIEIPS EDDGTVLLST VTAQFPGACG LRYRNPVSQC MRGVRLVEGI 60
LHAPDAGWGN LVYVVNYPKD NKRKMDEADA SSAVKVKRAV QKTSDLIVLG LPWKTTEQDL 120
KDYFSTFGEV LMVQVKKDLK TGHSKGFGFV RFTEYETQVK VMSQRHMIDG RWCDCKLPNS 180
KQSPDEPLRS RKVFVGRCTE DMTAEELQQF FCQYGEVVDV FIPKPFRAFA FVTFADDKVA 240
QSLCGEDLII KGISVHISNA EPKHNSNRQL ERSGRFGGKS PFGRS 286
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
PROSITE

PS50102--RRM
Pfam

PF00076--RRM_1
Gene Ontology

GO:0005737--C:cytoplasm
GO:0035061--C:interchromatin granule
GO:0016607--C:nuclear speck
GO:0005634--C:nucleus
GO:0005726--C:perichromatin fibrils
GO:0003690--F:double-stranded DNA binding
GO:0003730--F:mRNA 3'-UTR binding
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0001205--F:transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding
GO:0070935--P:3'-UTR-mediated mRNA stabilization
GO:0043922--P:negative regulation by host of viral transcription
GO:0001933--P:negative regulation of protein phosphorylation
GO:0030264--P:nuclear fragmentation involved in apoptotic nuclear change
GO:0071765--P:nuclear inner membrane organization
GO:0032024--P:positive regulation of insulin secretion
GO:0051726--P:regulation of cell cycle
GO:0034976--P:response to endoplasmic reticulum stress
GO:0008380--P:RNA splicing