dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0052668
Uniprot Accession G5EFF4; G5EFF4_CAEEL;
Genbank Protein ID NP_491997.1;
Genbank Nucleotide ID NM_059596.4;
Protein Name SEM-4 long form
Protein Synonyms/Alias
Gene Name sem-4
Gene Synonyms/Alias CELE_F15C11.1;F15C11.1;
Organism Caenorhabditis elegans
NCBI Taxa ID 6239
Functional Description
(View all)
Phosphorylation Sites
 dbPAF PTMs: 2
PositionPeptidesSourceReferences ( PMIDs )
24QSKPRRMSGEGDAMMPhospho.ELM 9.0;PHOSIDA;curated19530675; 21081558; 18806794
491AQLKNDSSPNTDTSSPhosphoPep 2.019060867
Sequence
(Fasta)		MNELLAEMAA VSSRRKQSKP RRMSGEGDAM MSPIDLSTKS FDENNCEKGA GGALPLEDRS 60
NILPHFSVPF ANPQQFLSLC AQLGNSSSRN VSSTASTTSS CPIQSCSQSF SSPAALTWHV 120
LDAHEDEQEI FSCDVCTTTF SNGQDIREHK CQKTLASRST SVPPSTIPSS VCFLSTPTTP 180
CLQFSINESI GTSEIREEDE EEDMDVEDGE HVANQLFGHL LQKSDDKSKM ASLFNHAFPP 240
FAAFPNMPPP FLMRQPFDPR ADVFAAGRHD NDDDWEALME ISTSDEAEKI RALVGDKAVP 300
TTDPNQCILC RRVLSCKSAL QMHYRTHTGE RPFKCKICQR AFTTKGNLKT HMGVHRSKHS 360
FRGLPISLPP QLAAMHQHQH QIAPPQRIHI HNPPTSAASA AAAVAQIQAS QQCPICQQRF 420
LNAGELAVHI TEHRNSLTQP PRVMPTPTTT RVQTFPFVPF FTTPPSLNAT DMSTQFNLAN 480
ILSAQLKNDS SPNTDTSSVE EKITRDDPPK MASLSPSNSS DSSSSVRQDI LESSEFEEKL 540
KKLEEPPILE QQVSTTPNPK NENPLLAMQK MWAETEPPPP RQMPVLSKHQ CGVCFKHFSS 600
SSALQIHMRT HTGDKPFKCD MCGRAFTTRG NLKVHMGTHS WQQSPSRRGR RIFDVASSVT 660
EKPMLQSPIL PTSGAPGASP LAMLGPNGLS GLEMMMMLWR TVCSVCQKVC QSPNELEQHL 720
KEHLNNGSSA APTPLASAAT PPPS 745
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR007087--Znf_C2H2
IPR015880--Znf_C2H2-like
IPR013087--Znf_C2H2/integrase_DNA-bd
PROSITE

PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2
Pfam

PF00096--zf-C2H2
Gene Ontology

GO:0005634--C:nucleus
GO:0046872--F:metal ion binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0048333--P:mesodermal cell differentiation
GO:0042692--P:muscle cell differentiation
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0014016--P:neuroblast differentiation
GO:0007165--P:signal transduction
GO:0060290--P:transdifferentiation