dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0052653
Uniprot Accession G5EF53; G5EF53_CAEEL;
Genbank Protein ID NP_502082.1;
Genbank Nucleotide ID NM_069681.5;
Protein Name SWI/SNF nucleosome remodeling complex component
Protein Synonyms/Alias
Gene Name swsn-4
Gene Synonyms/Alias psa-4;CELE_F01G4.1;F01G4.1;
Organism Caenorhabditis elegans
NCBI Taxa ID 6239
Functional Description
(View all)
Phosphorylation Sites
 dbPAF PTMs: 3
PositionPeptidesSourceReferences ( PMIDs )
450IVPRDQLSDDEEEEEPhospho.ELM 9.0;PHOSIDA;curated19530675; 21081558; 18806794
1388AQASTKVTPKKDEKKPhospho.ELM 9.0;PHOSIDA;PhosphoPep 2.0;curated19530675; 21081558; 19060867; 18806794
1464SRPTRRFSNEDEEEEPhospho.ELM 9.0;PHOSIDA;PhosphoPep 2.0;curated19530675; 21081558; 19060867; 18806794
Sequence
(Fasta)		MSGRPAFEQF TAQPPQPAGE VVAQQAGDGA QGQELTISKL ENAITSMEEQ GLQNDHRHAK 60
AVLLKQKLQS GLPDAVPGQE NGGNQQITPA QLNQLRAQVS AYRLLARNEQ VPANLIADAV 120
MLRPKVTTLL PEPYEYPGEA ENGEKLPYDL MKIFNLHQIR CNRPTTISVP SGIDPVGMLK 180
QRENMIQNRI GLRMKLLNNL PADIPDHMKL KAEIELRALR LVNLQTQVRS EVMACLKRDT 240
TLETALNPYA YRRTKRQSLR EARVTEKLEK QQKMEQERKR RQKHTDLMQA IIQHGKEFKE 300
YHRNNLLKMA KSRKAVMTYH QNNERERKKD EIRNEKLRMQ KLMQEDEEGY RALLDEKKDQ 360
RLVYLLQQTD EYVDSLCSLV RQHQNTEKKK KKEDKKIEKG NQMDEEARVH VRERSTGKAL 420
TGDQAPKTEE IEFWLETHPE YEIVPRDQLS DDEEEEEEEA PVEPEEEKDD QYAGMDEETK 480
AKMILEKARN EEDEYDQKTK KQMADYYATA HKIKEKVVKQ HTTMGGGDPN LLLKPYQIKG 540
LEWMVSLYNN NLNGILADEM GLGKTIQTIS LVTYLMEVKQ NNGPYLVIVP LSTLSNWQNE 600
FAKWAPSVTT IIYKGTKDAR RRVEGQIRKG AFNVLMTTYE YVIKEKALLG KIRWKYMIID 660
EGHRLKNHNC KLTLMLNGFF HAQHRLLLTG TPLQNKLPEL WALLNFLLPS IFSSCGTFEQ 720
WFNAPFATTG EKVELNQEET MLIIRRLHKV LRPFLLRRLK KEVESQLPDK TEYVIKCDQS 780
ALQKVIYRHM QKGLLLDAKM SSGARSLMNT VVHLRKLCNH PFLFPNIEDS CRAYWKVNEV 840
NGTDLMRVAG KLELLDRILP KLKATGHRIL MFFQMTSMMN IFEDFLNFRR YTYLRLDGST 900
KPDERGDLLT QFNAPNSDLF LFMLSTRAGG LGLNLQTADT VIIFDSDWNP HQDMQAQDRA 960
HRIGQKKEVR VLRLITANSV EEKILAAARY KLNVDEKVIQ AGKFDQRSTG AERKQMLEQI 1020
IQADGEEEEE EEVPDDETVN QMVARSEEEF NIFQSMDIDR RREEANQLHR KPRLLEEHEI 1080
PDDILKLSFD YEEMERAREE GREVVDQTPN QRRRRREVDY SSDLLSDEQF MKQVEEVEDE 1140
NNQAVAERKK QRKRKMAGLD ENDDSMDDVV LQHKKKKTDP ELAEKINEML DVILEYKNED 1200
GELIADVFQT LPTRKELPDY YQVISKPMDF DRINKKIETG RYTVMEELND DMNLLVNNAQ 1260
TYNEEGSEIY VSSETIGKLW KEQYDKFMNP PKPVEEPVKK KEPSTPSTSS SRPSTSGTPS 1320
VSDLQRTQQA TAQQMLMLMT HMQSLPPAQA QQFQQALMTQ TGGNQALMLQ YMQSAMLAQR 1380
AQASTKVTPK KDEKKETSSS VKTEEAKKDD EPSTSSASAP PPKKKKESED SEDPMEEDEE 1440
EEIIGQKKEP ASSRRKSRPT RRFSNEDEEE EDDE 1475
Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR006576--BRK_domain
IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR014978--Gln-Leu-Gln_QLQ
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014012--HSA_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51204--HSA
PS51666--QLQ
Pfam

PF07533--BRK
PF00439--Bromodomain
PF00271--Helicase_C
PF07529--HSA
PF08880--QLQ
PF00176--SNF2_N
Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0016817--F:hydrolase activity, acting on acid anhydrides
GO:0006355--P:regulation of transcription, DNA-templated