dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0052643
Uniprot Accession G5EEY5; G5EEY5_CAEEL;
Genbank Protein ID NP_001021008.1;
Genbank Nucleotide ID NM_001025837.3;
Protein Name PolyBRoMo domain containing
Protein Synonyms/Alias
Gene Name pbrm-1
Gene Synonyms/Alias C26C6.1;CELE_C26C6.1;
Organism Caenorhabditis elegans
NCBI Taxa ID 6239
Functional Description
(View all)
Phosphorylation Sites
 dbPAF PTMs: 11
PositionPeptidesSourceReferences ( PMIDs )
453LVPSFDVSQYEPAPAPhospho.ELM 9.0;PHOSIDA;curated19530675; 21081558; 18806794
463EPAPAQLTPVKPKATPhospho.ELM 9.0;PHOSIDA;curated19530675; 21081558; 18806794
485IEMPDTDSEDSRTPPPhosphoPep 2.019060867
490TDSEDSRTPPPTHKRPhosphoPep 2.019060867
511RENGSVPTPTFKGRKPhospho.ELM 9.0;PHOSIDA;curated19530675; 21081558; 18806794
681GRGKKNFSGSDDEESPhosphoPep 2.019060867
683GKKNFSGSDDEESARPhospho.ELM 9.0;PHOSIDA;PhosphoPep 2.0;curated19530675; 21081558; 19060867; 18806794
982AMVKRHESEVEMEDIPhospho.ELM 9.0;PHOSIDA;PhosphoPep 2.0;curated19530675; 21081558; 19060867; 18806794
1376IKMDKELSPLLKGEGPHOSIDA;curated21081558; 18806794
1417PKILKEGSPPATVQSPHOSIDA;PhosphoPep 2.0;curated21081558; 19060867; 18806794
1421KEGSPPATVQSQTSSPhosphoPep 2.019060867
Sequence
(Fasta)		MSTKRKRAAE PDPEKDVAST STASKKRKGR MTIAEKEKRE FEMAKGNYVM AQIRKHRSSA 60
GNNSVFESFL RLPPRRFEPE YYEQVKEPID VTTIQHKLKI PEYLTYDQFN DDFMMFIKNN 120
LTYYKDESEE HKDMMKIQEL FEAATAKVKS GEYLDDAEDE EGDEDVEETV QEEEEPEESG 180
TSSRDSTPMD LDHFMLCDLL GAVLEATDNT GRLLCPPFRV LQSREDFPLY YEKIAKPIDL 240
KTIAQNGVNK KYSTMKELKD DLFLLFKNAQ QFSGNGSDIF KDAEQLKTVV KEKIARLEEK 300
GVHPMRRAKA TRLVDALLTA VAVNENFSED SEEDEETETN SEPMWKLYWT IRNAVHEKDR 360
NVTLADNFLE LPSKESYPDY YDEIKNPVSI FMINKRLKNG KYDLKSLVAD LMQMYSNAFD 420
YNLESSEVYI SAEKLKALTI STCKQLVPSF DVSQYEPAPA QLTPVKPKAT PHRARIKIEM 480
PDTDSEDSRT PPPTHKRKSP KKPRENGSVP TPTFKGRKST IPVDPNAAYM KQKAMMQGLW 540
NVIHSYRVAS NPGHWPAGAF IQLPSAKQYP EYYQIIQNPI DMKTIRMRID GHQYPQVDAM 600
INDCRVMFSN ARDFNEPRSM IHMDAIQLEK AVLRAYEGMR NTSLGSSIPS TPHSSSSNLM 660
KAMKLKTPKS EVRGRGKKNF SGSDDEESAR INIQQHQRSM EDAIMQLPIE EQKMWRLFKS 720
MKDVREEGTN RPLAVNFMRL PSKEEFPAYY DVIKKPMDMM RIKHKLENRQ YVTLLDVVSD 780
FMLMLSNACK FNETDSDIYK EAVSLQKALL EMKRELDTGD DAPRVQVELR TIFTSIFASL 840
FSKKDEEGKC YSDHLTEFTE VLKANGVPSS EWPFTLDQIK MNIDKCRYRR LDKLQKDFFD 900
LFERARELSK AGSSMYEAAC TLQKSFIVER DTRCKDLIHS NAYCVIEKDI DEAIEKERSL 960
KAKEEHDEEG GNKPAMVKRH ESEVEMEDIE IDGTKYVAPC YAYVSRSDEK KTPLHIFRIE 1020
RTFKDENGEK ALQGHWVYRP EETLHLASRK FMKQEVFLTP FRDTVLAERL RGRCVVISLS 1080
TYTSKVITEY SEEDVYLCEY KYHGKPKYFA KLRTWPFTAE DEELEYTKRT KLMTPKRNLT 1140
AVDSDGNEGK DDVIVDGEEE EDEEDRARLE VSLDMERFEL EASKDEESGK TYFQQIRSET 1200
GKFFWLGQCV LVFNNMKPLC DVMKINKIWR EKDGSEWFSG CWFARPSETI HDEGRLFFKN 1260
EVIAVYRNDE TRKLCEIQRV CDVMPAKLYI KQRQTEVSEC DVFVCETMVN GSADTPDDCS 1320
LFGFQSIVDE FSDAQTMNLD YGKAMRKMKA HKLHVSIPNE EVLFYKQPIK MDKELSPLLK 1380
GEGVMPLDHL DEMMDDDTDG SESVSSSIHP KILKEGSPPA TVQSQTSSVS TPPQHPSISA 1440
EMPIMTPKAV KSKSGYILFS AEVRKRIMHE NPDAGFGEVS KIVGIEWKKL SEEQKKHYEM 1500
RAEVVAVEKA KQDAIKASQA MTLLPGQVRI YQCKWAACDS QYDTESALLE HVIQHHTSQI 1560
IMDSDQQFVC MWMTCLRNRK DGKPFPSLPR LHRHIKEKHM PTAAKNIYSN QLGKNFFKSI 1620
PNQGDTPGCR IVSAPYGQLP TAPSNGGIPP QQQHQQQQHH GNGMNGNMQQ GAPQVINRHP 1680
VSQQMHHQHP QHMQQHHDHH PHQQHYQQGG QPHPQMQMGP PQNGMFQQGS SSSQQYHQAP 1740
PQQMIQQQHQ QPGPPPQQQQ PQMQPIVVTD VGRTVVRAVV PAFVAPPNQI HSRRVLHSEA 1800
YLKYIESLAQ NRQKSVSRWE RTLGATARNT QPAGNARAPS HWIRRIENGR PVAREEDVTK 1860
ALWKLRDELL KSTCSLVMDR PTQ 1884
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR001025--BAH_dom
IPR001487--Bromodomain
IPR009071--HMG_box_dom
IPR007087--Znf_C2H2
IPR015880--Znf_C2H2-like
PROSITE

PS51038--BAH
PS50014--BROMODOMAIN_2
PS50118--HMG_BOX_2
PS00028--ZINC_FINGER_C2H2_1
Pfam

PF01426--BAH
PF00439--Bromodomain
PF00505--HMG_box
Gene Ontology

GO:0003682--F:chromatin binding
GO:0046872--F:metal ion binding