dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0052216
Uniprot Accession G3V7X8; CP26B_RAT; Q80YE5;
Genbank Protein ID NP_851601.1;
Genbank Nucleotide ID NM_181087.2;
Protein Name Cytochrome P450 26B1
Protein Synonyms/Alias
Gene Name Cyp26b1
Gene Synonyms/Alias
Organism Rattus norvegicus(Rat)
NCBI Taxa ID 10116
Functional Description
(View all)
Involved in the metabolism of retinoic acid (RA), rendering this classical morphogen inactive through oxidation. Involved in the specific inactivation of all-trans-retinoic acid (all-trans-RA), with a preference for the following substrates: all-trans-RA > 9-cis-RA > 13-cis-RA. Generates several hydroxylated forms of RA, including 4-OH-RA, 4-oxo-RA, and 18-OH-RA. Esential for postnatal survival. Plays a central role in germ cell development: acts by degrading RA in the developing testis, preventing STRA8 expression, thereby leading to delay of meiosis. Required for the maintenance of the undifferentiated state of male germ cells during embryonic development in Sertoli cells, inducing arrest in G0 phase of the cell cycle and preventing meiotic entry. Plays a role in skeletal development, both at the level of patterning and in the ossification of bone and the establishment of some synovial joints (By similarity).
Phosphorylation Sites
dbPAF PTMs: 2
PositionPeptidesSourceReferences ( PMIDs )
300LIFAAYATTASASTSdbPTM 3.0;PhosphoSitePlus;SysPTM 2.0;curated16641100; 16381945; 23193290; 22135298; 19366988; 22817900
307TTASASTSLIMQLLKdbPTM 3.0;PhosphoSitePlus;SysPTM 2.0;curated16641100; 16381945; 23193290; 22135298; 19366988; 22817900
Sequence
(Fasta)
MLFEGLELVS ALATLAACLV SVTLLLAVSQ QLWQLRWAAT RDKSCKLPIP KGSMGFPLIG 60
ETGHWLLQGS GFQSSRREKY GNVFKTHLLG RPLIRVTGAE NVRKILLGEH QLVSTEWPRS 120
ARVLLGPNTV ANSIGDIHRN KRKVFSKIFS HEALESYLPK IQLVIQDTLR AWSSQPEAIN 180
VYQEAQRLTF RMAVRVLLGF SIPEEDLGNL FEVYQQFVEN VFSLPVDLPF SGYRRGIQAR 240
QILQKGLEKA IREKLQCTQG KDYSDALDIL IESSKEHGKE MTMQELKDGT LELIFAAYAT 300
TASASTSLIM QLLKHPAVLE KLREELRAQG LLHGGGCPCE GTLRLDMLSG LRYLDCVIKE 360
VMRLFTPVSG GYRTVLQTFE LDGFQIPKGW SVMYSIRDTH DTAPVFKDVN VFDPDRFSQA 420
RSEDKDGRFH YLPFGGGVRT CLGKHLAKLF LKVLAVELAS TSRFELATRT FPRITLVPVL 480
HPVDGLSVKF FGLDSNQNEI LPETEAMLSA TV 513
Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0349--Heme
KW-0408--Iron
KW-0472--Membrane
KW-0479--Metal-binding
KW-0492--Microsome
KW-0503--Monooxygenase
KW-0560--Oxidoreductase
KW-1185--Reference proteome

Interpro

IPR001128--Cyt_P450
IPR017972--Cyt_P450_CS
IPR002403--Cyt_P450_E_grp-IV

PROSITE

PS00086--CYTOCHROME_P450

Pfam

PF00067--p450

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0020037--F:heme binding
GO:0005506--F:iron ion binding
GO:0008401--F:retinoic acid 4-hydroxylase activity
GO:0001972--F:retinoic acid binding
GO:0060349--P:bone morphogenesis
GO:0034653--P:retinoic acid catabolic process
GO:0042573--P:retinoic acid metabolic process