dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0052210
Uniprot Accession G3V7T6; G3V7T6_RAT;
Genbank Protein ID NP_445878.1; XP_006244995.1;
Genbank Nucleotide ID NM_053426.1; XM_006244933.2;
Protein Name Protein Sf3b1
Protein Synonyms/Alias
Gene Name Sf3b1
Gene Synonyms/Alias rCG_22317;
Organism Rattus norvegicus(Rat)
NCBI Taxa ID 10116
Functional Description
(View all)
Phosphorylation Sites
 dbPAF PTMs: 30 (View all)
PositionPeptidesSourceReferences ( PMIDs )
129HRRTMIISPERLDPFPhosphoSitePlus;curated22135298; 23712012; 21630457; 23984901
142PFADGGKTPDPKMNAPhosphoSitePlus;curated22135298; 23712012; 21630457; 23984901
190VVNGAAASQPPSKRKcurated23712012; 21630457; 23984901
194AAASQPPSKRKRRWDPhosphoSitePlus;curated22135298; 23712012; 21630457; 23984901
207WDQTADQTPGATPKKPhosphoSitePlus;curated22135298; 22817900; 21630457; 22276854
211ADQTPGATPKKLSSWPhosphoSitePlus;curated22135298; 22817900; 21630457; 22276854
223SSWDQAETPGHTPSLPhosphoSitePlus;curated22135298; 23984901
227QAETPGHTPSLRWDEPhosphoSitePlus22135298
235PSLRWDETPGRAKGSPhosphoSitePlus;curated22135298; 23712012; 21630457
242TPGRAKGSETPGATPcurated23712012; 21630457
244GRAKGSETPGATPGSPhosphoSitePlus;curated22135298; 23712012; 21630457
248GSETPGATPGSKIWDPhosphoSitePlus;curated22135298; 23712012; 21630457
251TPGATPGSKIWDPTPcurated23712012; 21630457
259KIWDPTPSHTPAGAAcurated23984901
261WDPTPSHTPAGAATPcurated23984901
296RKNRWDETPKTERDTPhosphoSitePlus22135298
303TPKTERDTPGHGSGWPhosphoSitePlus;curated22135298; 23712012; 21630457
308RDTPGHGSGWAETPRcurated23712012; 21630457
313HGSGWAETPRTDRGGPhosphoSitePlus22135298
322RTDRGGDSIGETPTPPhosphoSitePlus;curated22135298; 23712012; 21630457
Sequence
(Fasta)		MAKIAKTHED IEAQIREIQG KKAALDEAQG VGLDSTGYYD QEIYGGSDSR FAGYVTSIAA 60
TELEDDDDDY SSSTSLLGQK KPGYHAPVAL LNDIPQSTEQ YDPFAEHRPP KIADREDEYK 120
KHRRTMIISP ERLDPFADGG KTPDPKMNAR TYMDVMREQH LTKEEREIRQ QLAEKAKAGE 180
LKVVNGAAAS QPPSKRKRRW DQTADQTPGA TPKKLSSWDQ AETPGHTPSL RWDETPGRAK 240
GSETPGATPG SKIWDPTPSH TPAGAATPGR GDTPGHATPG HGGATSSARK NRWDETPKTE 300
RDTPGHGSGW AETPRTDRGG DSIGETPTPG ASKRKSRWDE TPASQMGGST PVLTPGKTPI 360
GTPAMNMATP TPGHIMSMTP EQLQAWRWER EIDERNRPLS DEELDAMFPE GYKVLPPPAG 420
YVPIRTPARK LTATPTPLGG MTGFHMQTED RTMKSVNDQP SGNLPFLKPD DIQYFDKLLV 480
DVDESTLSPE EQKERKIMKL LLKIKNGTPP MRKAALRQIT DKAREFGAGP LFNQILPLLM 540
SPTLEDQERH LLVKVIDRIL YKLDDLVRPY VHKILVVIEP LLIDEDYYAR VEGREIISNL 600
AKAAGLATMI STMRPDIDNM DEYVRNTTAR AFAVVASALG IPSLLPFLKA VCKSKKSWQA 660
RHTGIKIVQQ IAILMGCAIL PHLRSLVEII EHGLVDEQQK VRTISALAIA ALAEAATPYG 720
IESFDSVLKP LWKGIRQHRG KGLAAFLKAI GYLIPLMDAE YANYYTREVM LILIREFQSP 780
DEEMKKIVLK VVKQCCGTDG VEANYIKTEI LPPFFKHFWQ HRMALDRRNY RQLVDTTVEL 840
ANKVGAAEII SRIVDDLKDE AEQYRKMVME TIEKIMGNLG AADIDHKLEE QLIDGILYAF 900
QEQTTEDSVM LNGFGTVVNA LGKRVKPYLP QICGTVLWRL NNKSAKVRQQ AADLISRTAV 960
VMKTCQEEKL MGHLGVVLYE YLGEEYPEVL GSILGALKAI VNVIGMHKMT PPIKDLLPRL 1020
TPILKNRHEK VQENCIDLVG RIADRGAEYV SAREWMRICF ELLELLKAHK KAIRRATVNT 1080
FGYIAKAIGP HDVLATLLNN LKVQERQNRV CTTVAIAIVA ETCSPFTVLP ALMNEYRVPE 1140
LNVQNGVLKS LSFLFEYIGE MGKDYIYAVT PLLEDALMDR DLVHRQTASA VVQHMSLGVY 1200
GFGCEDSLNH LLNYVWPNVF ETSPHVIQAV MGALEGLRVA IGPCRMLQYC LQGLFHPARK 1260
VRDVYWKIYN SIYIGSQDAL IAHYPRIYND DKNTYIRYEL DYIL 1305
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR015016--SF3b_su1
PROSITE
Pfam

PF08920--SF3b1
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000785--C:chromatin
GO:0016363--C:nuclear matrix
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0005689--C:U12-type spliceosomal complex
GO:0005686--C:U2 snRNP
GO:0071004--C:U2-type prespliceosome
GO:0003682--F:chromatin binding
GO:0003729--F:mRNA binding
GO:0009952--P:anterior/posterior pattern specification
GO:0001825--P:blastocyst formation
GO:0000245--P:spliceosomal complex assembly