dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0050943
Uniprot Accession E9Q784; ZC3HD_MOUSE; B9EHN9;
Genbank Protein ID NP_080359.2; XP_006519508.1; XP_006519509.1; XP_006519510.1;
Genbank Nucleotide ID NM_026083.2; XM_006519445.2; XM_006519446.2; XM_006519447.2;
Protein Name Zinc finger CCCH domain-containing protein 13
Protein Synonyms/Alias
Gene Name Zc3h13
Gene Synonyms/Alias
Organism Mus musculus(Mouse)
NCBI Taxa ID 10090
Functional Description
(View all)		 Acts as component of the WTAP complex that is involved in RNA processing and cell cycle.
Phosphorylation Sites
 dbPAF PTMs: 97 (View all)
PositionPeptidesSourceReferences ( PMIDs )
13RKVTVENTKTISESTPhosphoSitePlus22135298
64CRFIHGPSPRGKGYSPHOSIDA;PhosphoSitePlus;curated21081558; 22135298; 22817900; 21183079
77YSSNYRRSPERPTGDPHOSIDA;PhosphoSitePlus;curated21081558; 22135298; 21743459; 22817900; 21183079; 25338131
82RRSPERPTGDLRERMPHOSIDA;PhosphoSitePlus21081558; 22135298
109KRNTEEPSSPVRKESPHOSIDA;PhosphoSitePlus;curated21081558; 22135298; 23684622; 21183079; 25338131
110RNTEEPSSPVRKESSPHOSIDA;PhosphoSitePlus;curated21081558; 22135298; 23684622; 21743459; 20469934; 23567750;
116SSPVRKESSRGRHRDPhosphoSitePlus22135298
134IKIVKERTPESEEENPHOSIDA;PhosphoSitePlus;curated21081558; 22135298; 22817900; 21183079; 25338131
137VKERTPESEEENVEWPHOSIDA;PhosphoSitePlus;curated21081558; 22135298; 22817900; 21183079; 25338131
146EENVEWETNRDDSDNPhosphoSitePlus;curated22135298; 22817900; 21183079
151WETNRDDSDNGDINYcurated21743459
198IIIQKEVSPEVVRSKPHOSIDA;PhosphoSitePlus;curated21081558; 22135298; 23684622; 22817900; 21183079; 24723360
204VSPEVVRSKLSPSPSPHOSIDA21081558
207EVVRSKLSPSPSLRKPHOSIDA;PhosphoSitePlus;SysPTM 2.0;curated21081558; 22135298; 17242355; 19366988; 21743459; 22817900;
209VRSKLSPSPSLRKSSPHOSIDA;PhosphoSitePlus;SysPTM 2.0;curated21081558; 22135298; 17242355; 19366988; 21743459; 21183079;
211SKLSPSPSLRKSSKSPHOSIDA;PhosphoSitePlus;curated21081558; 22135298; 22817900; 21183079; 25338131
242RKAAVVASPLLDQQRPHOSIDA;PhosphoSitePlus;curated21081558; 22135298; 22817900; 21183079; 25521595; 25338131
263SKKKGPRTPSPPPPIPHOSIDA;PhosphoSitePlus;SysPTM 2.0;curated21081558; 22135298; 18846507; 19366988; 21743459; 22817900;
265KKGPRTPSPPPPILEPHOSIDA;PhosphoSitePlus;SysPTM 2.0;curated21081558; 22135298; 18846507; 19366988; 21743459; 22817900;
284GKKYKEKYKVKDRIEPhosphoSitePlus22135298
Sequence
(Fasta)		MSKIRRKVTV ENTKTISEST SRRPSVFERL GPSTGSTTET QCRNWLKTGS CLYGNTCRFI 60
HGPSPRGKGY SSNYRRSPER PTGDLRERMK NKRQDVDSES QKRNTEEPSS PVRKESSRGR 120
HRDKEDIKIV KERTPESEEE NVEWETNRDD SDNGDINYDY VHELSLEMKR QKIQRELMKL 180
EQENMDKREE IIIQKEVSPE VVRSKLSPSP SLRKSSKSPK RKSSPKASSA GKKERKAAVV 240
ASPLLDQQRN SKGNQSKKKG PRTPSPPPPI LEDIILGKKY KEKYKVKDRI EEKPRDGKDR 300
GRDFEKQREK RDKPRSSSPG QHHSPLSSRH HSSSSQSGSS IQRHSPSPRR KRTPSPSYQR 360
TLTPSLRRSA SPYPTHCLSS PQRKQSPPRH RSPMREKGRH DHERTSQSHD RRHERREETR 420
GKRDREKDTR EERESEHDHR DDREPRDSRD RRDTRDRREL RDSRDMRDSR EMRDYSRDAK 480
ESRDPRDSRS ARDVHDYRDR EARDAHARDV RDARDARDAR DARDIRDVRD VRDVRDVRDV 540
RDVRDVRDVR DVRDARDVRD VRDARDVRDV RDVRDGHRKE DVYQEEARSY GRNHLREESS 600
RVELRNDSRN ESRSEIRNDR MGRSRGRGPE LPEKGSRGTR GSQMDSHSSG SNYHDSWETR 660
SSYPERDRYP ERDTRDPARD SSFERRHGER DRRDNRERDQ RPSSPIRHQG RSEELERDER 720
REERRIDRVD ERRDDRVRDR DRDRERERER EREREREREK ERERELERER AREREREREK 780
ERERERERER DQRDRDHDRE RERERERERE KEREREREER ERERERERER ERERERERER 840
ERERERERER AREREKERER QREWEDKDKG RDDRREKRED IHVREDRIPR DSHEERKSKK 900
RYRNEGSPSP RQSPKRRREH SPDSDTYHSG DDKNEKHRLL SQVVRPQESR SLSPSHLTED 960
RQGRWKEEDR KSERKESSRR YEEQELKEKL SCGDRQREQA ESVDSSRVRA QDLLSHRQAE 1020
DRDRDGSDRA HDEKKKAKAP KKPVKKKKEE DVGVERGNLE THEDSQVFSP KKGQKKKNIE 1080
KKRKRSKGDS DVSDEEAAPQ NKKKRGPRTP PLAIKEELAD ISTDKDGVLE DPLKKENTAF 1140
SDWSDEDVPD RTEGLEAEHT AATATPGSTP SPLSSLLPPP PPVAAASTAA TALASSAVSA 1200
TTSATSSSSA ATSNTNGSED SHRKCHRARG EKVEVSHVTL EDTPHRKLVD QKRSSSLGSN 1260
RSHRSHTSGR LRSPSNDSAH RSGDDQGSRK RVLHSGSRDR EKTKSLEITG ERKSRIDQLK 1320
RGEPSRSTSS DRQDSRSHSS RRSSPESDRQ VHSRSGSFDS RDRLQERDRY EHDRERERDR 1380
RDPRQREWDR EAEKEWPRTR DRDRLRERDR DRDRRRDLDR ERERLISDPM ERDRERERTF 1440
ETSQLESGKR SEVKLESEHE RDLEGSSRDS VALDKERMDR DLGSVQGFED VSKAERTESL 1500
EGDDESKLDD AHSLGSGAGE GYEPISDDEL DEILAGDAEK REDQQEEEKM PDPLDVIDVD 1560
WSGLMPKHPK EPREPGAALL KFTPGAVLLR VGISKKLAGS ELFTKVKETC QQLVEKPKDA 1620
DSLFEHELGA LNMAALLRKE ERASLLSDLG PCCKALCFRR DSAIRKQLVK NEKGTVKQAY 1680
TNTPMVDNEL LRLSLRLFKK KATCHAPGQE KTEDGKLGPC SIQQELCVS
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR000571--Znf_CCCH
PROSITE

PS50103--ZF_C3H1
Pfam

PF00642--zf-CCCH
Gene Ontology

GO:0016607--C:nuclear speck
GO:0005654--C:nucleoplasm
GO:0046872--F:metal ion binding
GO:0044822--F:poly(A) RNA binding