dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0044133
Uniprot Accession Q9Y7V2; BYE1_SCHPO; Q1MXG6; Q9UTW8; Q9UU07;
Genbank Protein ID NP_588122.1;
Genbank Nucleotide ID NM_001023112.2;
Protein Name Transcription factor bye1
Protein Synonyms/Alias
Gene Name bye1
Gene Synonyms/Alias SPCC645.13;
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast)
NCBI Taxa ID 284812
Functional Description
(View all)
Negative regulator of transcription elongation.
Phosphorylation Sites
dbPAF PTMs: 1
PositionPeptidesSourceReferences ( PMIDs )
79VSSQVQNSPNKDEEHcurated22817900
Sequence
(Fasta)
MVRKSTRRTA KASEKPPETV VRCVCKSQED IGDTWVQCDG CDCWQHASCV GLADKDIPES 60
YYCEVCHSRS DVSSQVQNSP NKDEEHQTAD LLASNEGNEK NNEENNVVSS DSKEAITKES 120
GAELESSEPA STNSNVGMTT RSGRQSPRTP IGSTTPKSSH SPPSTRKRRG SVGTTATHTK 180
RSKNAPKTSP KDASNETADQ EKELSLHTSI DEIQNPVRKS VAKAWVSVFE KIIEKAKLEG 240
VQGLEDLNST SLALQLEHIM FMVLSYTTDH SLTPNNKYRE KFRALRFNLV DDKNPAFRAR 300
VLKNEISFND LVNLSSEEMA NPDLKNLAEE IRQQSTENTV IKQHLIAPRD RLLDEDKLTQ 360
QDELGIAEND DAMFPKPPGE LVAPISIAEE EPTIDSKSPT LPEHNPLSED DTSNGDKAAK 420
RKGSFNDTKP IVNVPSIVEI DDPTILDIVE EEPLARNDSF SSPYSPAEDM AEESEFFGMK 480
EKIWTGKVKM ATVSEFHANA LNLFGDVSAS HLFEILSATA LIEGRISVSS VLQYFHALRK 540
TPSKEIIAVL FVPTEQNSQG FDILYDYFVK RNRYGVLHSK SNSVKDAYII PMPSGNSVPE 600
LLDLLPKVDL PKDRNFQYFM GLFVLNKSSS RHESVERATP ITTSTNGIPS TYQSASGTPT 660
NPVHSYPSLE SIINALTPSD MLLIKDVVEN NPQIRANPSL AINPQFMQNA ISAAQKKASK 720
Q 722
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012921--SPOC_C
IPR003618--TFIIS_cen_dom
IPR017890--TFS2M
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51321--TFIIS_CENTRAL
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD
PF07744--SPOC
PF07500--TFIIS_M

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0034244--P:negative regulation of transcription elongation from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated