dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0044117
Uniprot Accession Q9Y7M4; LSM3_SCHPO;
Genbank Protein ID NP_595747.1;
Genbank Nucleotide ID NM_001021647.2;
Protein Name Probable U6 snRNA-associated Sm-like protein LSm3
Protein Synonyms/Alias
Gene Name lsm3
Gene Synonyms/Alias SPBC9B6.05c;
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast)
NCBI Taxa ID 284812
Functional Description
(View all)
Binds specifically to the 3'-terminal U-tract of U6 snRNA.
Phosphorylation Sites
dbPAF PTMs: 1
PositionPeptidesSourceReferences ( PMIDs )
84MLFVRGDSVILIAPPdbPTM 3.0;SysPTM 2.0;UniProt;curated18257517; 16381945; 23193290; 19366988; 22817900
Sequence
(Fasta)
MESAQAVAEP LDLVRLSLDE IVYVKLRGDR ELNGRLHAYD EHLNMVLGDA EEIVTIFDDE 60
ETDKDKALKT IRKHYEMLFV RGDSVILIAP PRN 94
Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0694--RNA-binding
KW-0747--Spliceosome

Interpro

IPR010920--LSM_dom
IPR001163--LSM_dom_euk/arc

PROSITE
Pfam

PF01423--LSM

Gene Ontology

GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0005732--C:small nucleolar ribonucleoprotein complex
GO:0005681--C:spliceosomal complex
GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0005688--C:U6 snRNP
GO:0003723--F:RNA binding
GO:0006402--P:mRNA catabolic process
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0006364--P:rRNA processing