dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0040883
Uniprot Accession Q9UTK4; NU189_SCHPO; P78796;
Genbank Protein ID NP_594093.1;
Genbank Nucleotide ID NM_001019517.2;
Protein Name Nucleoporin nup189
Protein Synonyms/Alias Nuclear pore protein nup189;
Gene Name nup189
Gene Synonyms/Alias SPAC1486.05;
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast)
NCBI Taxa ID 284812
Functional Description
(View all)
Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. Active directional transport is assured by both, a Phe-Gly (FG) repeat affinity gradient for these transport factors across the NPC and a transport cofactor concentration gradient across the nuclear envelope.
Phosphorylation Sites
dbPAF PTMs: 4
PositionPeptidesSourceReferences ( PMIDs )
684SLPQFWLSPRSHNTAdbPTM 3.0;SysPTM 2.0;curated18257517; 16381945; 23193290; 19366988; 22817900
695HNTARLASISSFAKSdbPTM 3.0;SysPTM 2.0;UniProt;curated18257517; 16381945; 23193290; 19366988; 22817900
1022KVKLDFSSDSNVSERdbPTM 3.0;UniProt18257517; 16381945; 23193290
1024KLDFSSDSNVSERGDcurated22817900
Sequence
(Fasta)
MFGQNNSSGF GGGTGAFGQN NQQTGGLFGS NSNTPGNTLF GSQNTSTTGF GQNTTQPLFG 60
SNTNGGLFGN RNNTTTTGGT GFGMSSGTGM FGQSNTPAFG GTNNATNPSG GGLFGSNTAN 120
NNANTGTSFS FGSNAGSTGF GSQGTGGGLF GSSTTPATTN AFGTSGFVSS NANAVNGTAN 180
PPYAVTSEKD PQTNGTSVFQ SITCMPAYRS YSFEELRLQD YNQGRRFGNA SSTNTTSAFG 240
STPAFGASTT PFGQNLSGTT NNATPFGTSN ATNTTPGSGL FGGGSAFGSN TTNTGFGSGT 300
NNASGGLFGQ NNNTTSTPST GLFGGSTFNQ QKPAFSGFGS TTNTTNTGTG TGLFGSNNAT 360
NTGTGQTTGG LFGGAATGTG TGFGSSTGGF GSNTNNQPNS GTMGTGLFGF GANNNTANNN 420
TAPTSTFGGN NSSNFSFGAN NNAATKPSGF GFGSTTTTPA SGGFSFGQNA NNAPKPAFGS 480
TATTAPKPAG TGLFGGLGAG ANTNTATNAT GTGGSLFGNA NTAGSNMFGS ANSSTPGTGL 540
FGSTQTNNAT SNTGTGLFGS NNANTTNTGG SLFNKPSTTT GGLFGNTTAQ QPSTTTSGLF 600
GASNTNNQAQ TSNFGTGLFG GSQAGQQQQP LQASIDQNPY GNNPLFSSTT SQVAPTSIQE 660
PIASPLTSKP TPKKAASLPQ FWLSPRSHNT ARLASISSFA KSAVMNSTSA SGKPKSLHLF 720
DSLNDDVLLS ADAFTPRQNI KKLVITHKIS KDDILQNGVK NGNDAKSDSK VQEKAPQNEA 780
DGSLKKDEHV VLSDDYWMKP SIEELSKYPK EKLCSVHQFS VGRTGYGQVA FLKPVDLSGF 840
EKLEDIPGKV VVFERKICAV YPVEGSSPPL GEGLNVPAII TLEKTWPLSR ETREPIKDPQ 900
NPRYIQHVKR LHRIKDTEFI DFNDGKWIFK VQHFSRYGLL DDEEEENDMS STSNEAGNLK 960
KYDQPNLKVS GKNDSFVTHH TPGAFPNDSK NKELNRHFLK VDDSAPLDDT FMSKKVKLDF 1020
SSDSNVSERG DYDDNAKKVD EVISIEKVDG YSKENNVPLS EDDLSNSSES SNESVYSLVE 1080
ESDASLAADN MDIEDISEES DREELSSMRF GAQDFHGLVV TDNWRDQLNL SVQRSALIKA 1140
AFPESQSNAN LKNSRGIYYN EHDLVTDIFG NQNLDTDRPW QSLDKPGAFI PSKFHFTANG 1200
SCIYVLKSSD VKIRSIYDFI PTKDPNGTKL LEYQLDQTEV YLDLSGTHAA SPRSSMTVKP 1260
LSLCSSGYES IVWDLTSILF DPKNYSLPSE LSSEAREVLY QKLVRESLSE WITKTLEHET 1320
TTLAKEAETS EERIYILLTG NLIGQACEEA VQSQNNRLST LIPLVNSDVD IQQEVKQQLE 1380
EWRKHGDLPF INKFTRLIFE LLSGNTDIAE GCGTKGDEDY VQSIPITKNM TWLRAFGLKL 1440
WYNTDISIGE AMQLYVESLQ KFPEIMQKPI ATSAVQGIEV YDIIYLLLKA YAMGTSLEEL 1500
TIPESAKCSP LNYRVVWQLA IYLSKARSLC DFSDRVVDIN MAEDLKPISV HSDQLTLAYA 1560
SQLEASGQWL WSLFVLLHLE NVETRTSTIT SCLARNLRGG LGAGAVEMIE KLCIPESWLN 1620
EAKALYARYV GDHLNELYFL QEAALYEDAH KVLLDTLAPQ AVISGNKTQL KKALEGFNGQ 1680
TDGLASWRFG GQIYSDYLDL LEGNFDANQE LKLFTLRKIS VALKELNATN LLQKAALHKI 1740
SRFVNALCNE ESLTDAICNL PLPLADSLAN LQNISVQF 1779
Keyword

KW-0181--Complete proteome
KW-0903--Direct protein sequencing
KW-0509--mRNA transport
KW-0906--Nuclear pore complex
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0811--Translocation
KW-0813--Transport

Interpro

IPR025574--Nucleoporin_FG_rpt
IPR021967--Nup96
IPR007230--Peptidase_S59

PROSITE

PS51434--NUP_C

Pfam

PF04096--Nucleoporin2
PF13634--Nucleoporin_FG
PF12110--Nup96

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0034399--C:nuclear periphery
GO:0005643--C:nuclear pore
GO:0031080--C:nuclear pore outer ring
GO:0008233--F:peptidase activity
GO:0051028--P:mRNA transport
GO:0015031--P:protein transport
GO:0006508--P:proteolysis
GO:0006407--P:rRNA export from nucleus