dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0040879
Uniprot Accession Q9UTE3; SEB1_SCHPO; O74176; Q9UTX2;
Genbank Protein ID NP_593148.1;
Genbank Nucleotide ID NM_001018545.2;
Protein Name Rpb7-binding protein seb1
Protein Synonyms/Alias
Gene Name seb1
Gene Synonyms/Alias SPAC222.09;
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast)
NCBI Taxa ID 284812
Functional Description
(View all)		 Involved in the processing of pol II transcripts.
Phosphorylation Sites
 dbPAF PTMs: 1
PositionPeptidesSourceReferences ( PMIDs )
343SQSLRLGSLHRSRSPdbPTM 3.0;SysPTM 2.0;UniProt;curated18257517; 16381945; 23193290; 19366988; 22817900
Sequence
(Fasta)		MSGIAEFDGI LDSLEHSKTG ISGSKILKLT NLSMENVSEN AQFVASVYKY AKRAPVTHKL 60
GALYILDSIV RSFQDGAKKN NESFENPVDA SFSGGWCKAA EITDSLVADA IQHAPSAHLP 120
KILKLCDIWE KASTFPPEKL ESLRSKLKDA MASTEPVSVD SAAAPSQSTN PEGNGGSVGS 180
QAAAPTSRPV ENDAASILEA LAAFAQKAPV PSAAEESVST PPQPAVAPSV SAVVPNLPVH 240
PATAINAQSQ SGNPLSNPLF QPSNVPQSIP SGPMGMKTGS VNDTQSQQIT LMNVLASQNV 300
PPAQIDSIMK AAFPNYNAPF QPAGVGSVPL PAPTSSQSLR LGSLHRSRSP SPRSGRPRRS 360
PSPSHLSIPS TLPPADGVPK PTPDGFPRRF ERDPTIPPDS IKVYSRTLFL GGITRSVREP 420
VLRSMFERFG SVQSLILNHN YRHGFLKMFR RDAAEKAQVA MENVPFADTT IRTKWGVGFG 480
PRECSDFSTG ISVIPIRLLT DADRTWLVTA EYGGTGGLPI TPGIALDEPD IEIGLGISSK 540
AISKRGKDFA MRRDERFRGR KPYRGGPPIH HGERHFDSGN DWHGNPSTVP PPTNPYNPGY 600
PYMDPNYSSG YVSQPPWQPQ 621
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0694--RNA-binding
Interpro

IPR006569--CID_dom
IPR008942--ENTH_VHS
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
PROSITE

PS51391--CID
PS50102--RRM
Pfam

PF00076--RRM_1
Gene Ontology

GO:0035649--C:Nrd1 complex
GO:0005634--C:nucleus
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0031123--P:RNA 3'-end processing
GO:0030847--P:termination of RNA polymerase II transcription, exosome-dependent