| Tag |
Content |
| dbPAF ID |
dbPAF-0040809 |
| Uniprot Accession |
Q9URY0; YTM1_SCHPO;
|
| Genbank Protein ID |
NP_594822.1;
|
| Genbank Nucleotide ID |
NM_001020251.2;
|
| Protein Name |
Ribosome biogenesis protein ytm1 |
| Protein Synonyms/Alias |
|
| Gene Name |
ytm1 |
| Gene Synonyms/Alias |
SPAC890.04c; |
| Organism |
Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast) |
| NCBI Taxa ID |
284812 |
Functional Description
(View all) |
Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.Functional Description
Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. |
Phosphorylation Sites
|
dbPAF PTMs: 2 |
Sequence
(Fasta) | MDAQSAPSGQ VQVRFTTRNE DLAVGDTPIF VPTSLKRYGL SQIVNHLLKT EKPTPFDFLV 60
QGQLLKTTLD EYIVQNGLST ESILDIEYIQ STLPPAYLAS FSHDDWISGI QLTSDTILTS 120
SYDGIARVWD KSGEIKFQST GCGSSLKSAS WHIPNQSFLT ASLDQKIFHW VIEEPESMLD 180
AEKKSSGILQ TLFVGHKDIV ERVRSLESSS VFISASADNT VGIWDFERSP ETTLESFSSS 240
ISKKRRRKNA EFTPQAGARS PLILCEGHTG PVMDIVFSDD PSVAYSVGQD HTIKTWDLIT 300
GQNVDSKITK APLLCVEKLT DLHLVICGSS ARHIVVHDPR AGSDKIVSHT LSGHKNLVSG 360
LSASPENPYM FASVSHDNTC RVWDVRATSG SIYTISRAEK TGSQWDKLFA VDWNKSIGIV 420
TGGTDKQLQI NQSSSFGKSE
441Fasta Sequence
>Q9URY0|ytm1|Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast)
MDAQSAPSGQVQVRFTTRNEDLAVGDTPIFVPTSLKRYGLSQIVNHLLKTEKPTPFDFLVQGQLLKTTLDEYIVQNGLSTESILDIEYIQSTLPPAYLASFSHDDWISGIQLTSDTILTSSYDGIARVWDKSGEIKFQSTGCGSSLKSASWHIPNQSFLTASLDQKIFHWVIEEPESMLDAEKKSSGILQTLFVGHKDIVERVRSLESSSVFISASADNTVGIWDFERSPETTLESFSSSISKKRRRKNAEFTPQAGARSPLILCEGHTGPVMDIVFSDDPSVAYSVGQDHTIKTWDLITGQNVDSKITKAPLLCVEKLTDLHLVICGSSARHIVVHDPRAGSDKIVSHTLSGHKNLVSGLSASPENPYMFASVSHDNTCRVWDVRATSGSIYTISRAEKTGSQWDKLFAVDWNKSIGIVTGGTDKQLQINQSSSFGKSE
|
| Keyword |
KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat
|
| Interpro |
IPR020472--G-protein_beta_WD-40_rep
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR028599--WDR12/Ytm1
|
| PROSITE |
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
|
| Pfam |
PF08154--NLE
PF00400--WD40
|
| Gene Ontology |
GO:0015630--C:microtubule cytoskeleton
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5
8S rRNA fr--m tricistronic rRNA transcript (SSU-rRNA, 5
8S rRNA, L--U-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5
8S rRNA, L--U-rRNA)
GO:0042254--P:ribosome biogenesis
|
