dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0039427
Uniprot Accession Q9P783; RRB1_SCHPO;
Genbank Protein ID NP_595880.1;
Genbank Nucleotide ID NM_001021786.2;
Protein Name Ribosome assembly protein rrb1
Protein Synonyms/Alias
Gene Name rrb1
Gene Synonyms/Alias SPBC1711.07;
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast)
NCBI Taxa ID 284812
Functional Description
(View all)
Involved in regulation of L3 expression and stability and plays a role in early 60S ribosomal subunit assembly. May be required for proper assembly of pre-ribosomal particles during early ribosome biogenesis, presumably by targeting L3 onto the 35S precursor rRNA (By similarity).
Phosphorylation Sites
dbPAF PTMs: 2
PositionPeptidesSourceReferences ( PMIDs )
163HDENDDASDNSDVEEdbPTM 3.0;UniProt;curated18257517; 16381945; 23193290; 22817900
166NDDASDNSDVEEDPIdbPTM 3.0;UniProt;curated18257517; 16381945; 23193290; 22817900
Sequence
(Fasta)
MSKRAAEETV EFNSKNGPGQ RGTVADNVDT EMGEFEDAYE DEIESEEEYI EADGEKDNGM 60
DEEEQNDAQP SKIPWLPGGK INADEKLVAD PSVYEMLHNI QVKWPFLSFD ILQDSLGEER 120
RAWPHQMYLV GGSQALDSND NELTVMKLSQ LYKTQHDEND DASDNSDVEE DPILEHKSIS 180
TKGACNRVRS ARRPANSSKE SLLASFHETG KVHIWDIAPH LRSLDSPGVM VSRKENSPLY 240
TVNRHKTEGY ALDWSPFEYS LLSGDNANEI FLTKYSNGGW QTDSSPFLSH TAAVEDLQWS 300
PSEKNVFSSC SCDGTFRIWD VRNKQKTSAL TVNAHPGVDV NVLSWNTRVP NLLATGADNG 360
VWSVWDLRSL KSSSSVATPV ASFKWHRAPI YSIEWHPNED SVIGVVGADN QISLWDLSVE 420
LDEEEQDSRA AEGLQDVPPQ LMFIHMGQQE IKEMHWHRQI PGTIVSTAMT GINVFKTITF 480
481
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0043234--C:protein complex
GO:0042254--P:ribosome biogenesis
GO:0006364--P:rRNA processing