dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0039420
Uniprot Accession Q9P6R9; CWC22_SCHPO; O74321; P78752;
Genbank Protein ID
Genbank Nucleotide ID
Protein Name Pre-mRNA-splicing factor cwf22
Protein Synonyms/Alias Complexed with cdc5 protein 22;
Gene Name cwf22
Gene Synonyms/Alias SPBC13E7.01;SPBC15D4.16;
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast)
NCBI Taxa ID 284812
Functional Description
(View all)
May be involved in pre-mRNA splicing.
Phosphorylation Sites
dbPAF PTMs: 4
PositionPeptidesSourceReferences ( PMIDs )
662RSYSRSRSVTPINNIdbPTM 3.0;SysPTM 2.0;UniProt18257517; 16381945; 23193290; 19366988
664YSRSRSVTPINNINHdbPTM 3.0;SysPTM 2.0;UniProt18257517; 16381945; 23193290; 19366988
696SSNRNSYSDLSRSSSdbPTM 3.0;SysPTM 2.018257517; 16381945; 23193290; 19366988
699RNSYSDLSRSSSLSRdbPTM 3.0;SysPTM 2.018257517; 16381945; 23193290; 19366988
Sequence
(Fasta)
MEKEDKSFGI GMLDYNRENP ESSGHSRVAV IRKQKTEQEN NNLSWEDRHY IPDLHKSNKI 60
KTPTSLADEK KSHNELDPKA QIKKLMETRS GGTYIPPAKL KALQAQLTDV NTPEYQRMQW 120
EALKKSINGL INKVNKSNIR DIIPELFQEN IIRGRALYCR SIMKAQAASL PFTPIYAAMT 180
AVINTKFPQI GELLLTRLIV QFRKSFQRND KSMCISSSSF IAHLINQKIA HEIVGLQILA 240
VLLERPTNDS IEIAVMLLRE IGAYLAEVST RAYNGVFERF RTILHEGQLE RRTQFIIEVL 300
FQTRKDKFKN NPTIPQELDL VEEEDQITHY ISLDDNLDVQ ESLGIFHYDP DYEENEKKYD 360
AIKHEILGEE DDDENEEDEE DSEETSESEE DESVNDEKPQ VIDQTNASLV NLRKSIYLTI 420
MSSVDFEECC HKLLKIDLPE GQEIELCNMV IECNSQERTY AKFYGLIGER FCKLSRTWRS 480
TYEQCFKNYY ETIHRYETNR LRNIALFFAN LLSTDSIGWE VYDCVRLTED DTTASSRIFL 540
KIMFQEIVEA LGLKSLVERL HDPNLVPYLH GLFPVDEARN VRFSINYFTS IGLGALTEEM 600
REYLLTMPKS EPKEQDSEGY SSGSETGSTY SSSYSSTYSR GRSYSRSTRS YSKSRSYSRS 660
RSVTPINNIN HKKYIRKDRE LSPRGRERSS NRNSYSDLSR SSSLSRGRSR SYTPEGRLIE 720
SEDKGYRSRS SSPASRKYRS RQRYRRSYAG STSRGRSFSR SPSYRRRLSM SCSVSYSRSP 780
SPAARPISRS PARNKRSYDS LSYNRQYSPK VSRKRSNESR SPSPYTLRKQ KTYHLNKRNE 840
DFVVKMDKKG SESPVILAPW LREVDDGELY KDRNSESDSV RKQPRAD 888
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0747--Spliceosome

Interpro

IPR016024--ARM-type_fold
IPR003891--Initiation_fac_eIF4g_MI
IPR016021--MIF4-like
IPR003890--MIF4G-like_typ-3

PROSITE

PS51366--MI

Pfam

PF02847--MA3

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005681--C:spliceosomal complex
GO:0005684--C:U2-type spliceosomal complex
GO:0003723--F:RNA binding
GO:0045292--P:mRNA cis splicing, via spliceosome