dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0039418
Uniprot Accession Q9P6R7; VTS1_SCHPO;
Genbank Protein ID NP_596258.1;
Genbank Nucleotide ID NM_001022178.2;
Protein Name Protein vts1
Protein Synonyms/Alias
Gene Name SPBC13E7.03c
Gene Synonyms/Alias
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast)
NCBI Taxa ID 284812
Functional Description
(View all)		 RNA-binding protein involved in post-transcriptional regulation through transcript degradation. May be involved in vacuolar protein transport (By similarity).
Phosphorylation Sites
 dbPAF PTMs: 7
PositionPeptidesSourceReferences ( PMIDs )
25PSSRQKQTIAVSLVDcurated22817900
38VDGKNYPTRFLNSRTcurated22817900
171PSSPKGDSPSLSSSLcurated22817900
261EPPASSASTSPRNTPcurated22817900
263PASSASTSPRNTPTPcurated22817900
673LKAAKNQSSESLTSFdbPTM 3.0;UniProt;curated18257517; 16381945; 23193290; 22817900
676AKNQSSESLTSFKGHcurated22817900
Sequence
(Fasta)		MEVVEGRRKT CLDVVDSPSS RQKQTIAVSL VDGKNYPTRF LNSRTIDKLK QELNTSNLST 60
GEMSTNETLK NAQEVAGKLL SEENEDSISE HFDEYLGADK PGISFLTRLK TLESWFQSLS 120
LQDRLTTLRT LLHHLPSQEI STLLSSSLTS SPSNSGLSLD KSLPSSPKGD SPSLSSSLPS 180
LTTKSNLSGN LNMVTPASTQ GPAFSSKHGF SNALSTASPI PVRTSSVSST YLTQDREASS 240
KNCLSKALAF SSIEPPASSA STSPRNTPTP SNNGTSINAN VTSSLTSNST GKTSKTTDLL 300
IAASKKSLPS NSTPSKPNTS FFETPHNNIW DSRDRGAFSA PPAPFFPLGF SPHLNDESSR 360
SRWSNISYSP PPPPPPPELL NHSPKSRPLG DKPYLFYRNN QIGPRTRTEG RSSITEGKPF 420
LSSSLRFEHV PSANDLNSVV NARVEKSTGQ PSTPLNRQHY FNELPHSTTP VTLPSLIHGS 480
EIDRRRSGFC LNNFNSTPPF QPYHYEIGSG LPQQMHATNT ILTNPIDPNS NISTPVGMHL 540
CTLPYTYQPF SSVEKIETPP NNSKNQTYRR SSRGSNKTRK SISHSKNTDK HVGNELPQDI 600
PSWLRSLRLH KYTNNLKDTD WDALVSLSDL DLQNRGIMAL GARRKLLKSF QEVAPLVSSK 660
KMNENLKAAK NQSSESLTSF KGHTDSEDLP SGSMSNEISS NSTKQDVSSS SMD 714
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0547--Nucleotide-binding
KW-0597--Phosphoprotein
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0694--RNA-binding
KW-0813--Transport
Interpro

IPR001660--SAM
IPR013761--SAM/pointed
PROSITE

PS50105--SAM_DOMAIN
Pfam

PF07647--SAM_2
Gene Ontology

GO:0005829--C:cytosol
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0000289--P:nuclear-transcribed mRNA poly(A) tail shortening
GO:0015031--P:protein transport