dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0034311
Uniprot Accession Q99326; YO338_YEAST; D6W333; Q06855;
Genbank Protein ID NP_014983.1;
Genbank Nucleotide ID NM_001183758.1;
Protein Name SWIRM domain-containing protein YOR338W
Protein Synonyms/Alias
Gene Name YOR338W
Gene Synonyms/Alias O6265;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)
Phosphorylation Sites
 dbPAF PTMs: 5
PositionPeptidesSourceReferences ( PMIDs )
194YEDDGNRSENYDEEScurated25315811
197DGNRSENYDEESAQEdbPTM 3.0;SysPTM 2.018407956; 16381945; 23193290; 19366988
209AQEVPVRSVTPIRQVPhosphoGRID 2.021126336
222QVKRSLHTISSPLASdbPTM 3.0;PhosphoGRID 2.0;SysPTM 2.0;curated18407956; 16381945; 23193290; 19366988
225RSLHTISSPLASQGVdbPTM 3.0;PhosphoGRID 2.0;PhosphoPep 2.0;SysPTM 2.0;curated18407956; 16381945; 23193290; 19060867; 19366988
Sequence
(Fasta)		MLDNMQFHSP APEHPQLNGG INKIPASHKI GYKLNQQVQR LAVVRNNIEE RLNSMESSHG 60
QISDSSVVRA IDASIDDFLI PSPPLSPKLR QCPIISQPQL VNVESDHREL IMLTPVWEAG 120
LNSQKYNHNT RNFLSQYSFF RDMKTTKRIP NKENRKLKVV KSVVNSEALP KRRRYDRKIK 180
RRSRELYEDD GNRSENYDEE SAQEVPVRSV TPIRQVKRSL HTISSPLASQ GVVNNVPKYI 240
PSMSWEKLPD YSPPLHTLPN SNNKVLKVEW KGSPMDLNHD PLKQRLHPAE LVLAQILRLP 300
CDLYLDSKRR FFLEKVHRFK KGLPFRRTDA QKACRIDVNK ASRLFAAFEK VGWLQDKHFE 360
KYL 364
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0346--Stress response
Interpro

IPR009057--Homeodomain-like
IPR007526--SWIRM
PROSITE

PS50934--SWIRM
Pfam
Gene Ontology

GO:0070461--C:SAGA-type complex
GO:0003682--F:chromatin binding
GO:0003677--F:DNA binding
GO:0003713--F:transcription coactivator activity
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0006338--P:chromatin remodeling
GO:0016573--P:histone acetylation
GO:0035066--P:positive regulation of histone acetylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter