dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0016718
Uniprot Accession Q12517; DCP1_YEAST; D6W1S0;
Genbank Protein ID NP_014492.1;
Genbank Nucleotide ID NM_001183403.1;
Protein Name mRNA-decapping enzyme subunit 1
Protein Synonyms/Alias
Gene Name DCP1
Gene Synonyms/Alias YOL149W;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)
Component of the decapping complex necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Decapping is the major pathway of mRNA degradation in yeast. It occurs through deadenylation, decapping and subsequent 5' to 3' exonucleolytic decay of the transcript body. DCP1 is activated by the DEAD-box helicase DHH1 and destabilizes the eIF-4F cap-binding complex from the mRNA.
Phosphorylation Sites
dbPAF PTMs: 4
PositionPeptidesSourceReferences ( PMIDs )
111SDNSNRNSSGNGNSYcurated25315811
112DNSNRNSSGNGNSYKcurated25315811
120GNGNSYKSNDSLTYNcurated25315811
123NSYKSNDSLTYNCGKcurated25315811
Sequence
(Fasta)
MTGAATAAEN SATQLEFYRK ALNFNVIGRY DPKIKQLLFH TPHASLYKWD FKKDEWNKLE 60
YQGVLAIYLR DVSQNTNLLP VSPQEVDIFD SQNGSNNIQV NNGSDNSNRN SSGNGNSYKS 120
NDSLTYNCGK TLSGKDIYNY GLIILNRINP DNFSMGIVPN SVVNKRKVFN AEEDTLNPLE 180
CMGVEVKDEL VIIKNLKHEV YGIWIHTVSD RQNIYELIKY LLENEPKDSF A 232
Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0903--Direct protein sequencing
KW-0507--mRNA processing
KW-0866--Nonsense-mediated mRNA decay
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0694--RNA-binding

Interpro

IPR010334--Dcp1
IPR011993--PH/PTB_dom

PROSITE
Pfam

PF06058--DCP1

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000932--C:cytoplasmic mRNA processing body
GO:0005634--C:nucleus
GO:0008047--F:enzyme activator activity
GO:0003729--F:mRNA binding
GO:0000290--P:deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0006397--P:mRNA processing
GO:0000184--P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0043085--P:positive regulation of catalytic activity