dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0016674
Uniprot Accession Q12445; POM34_YEAST; D6VY20; E9P8U3; Q7LGY6;
Genbank Protein ID NP_013118.1;
Genbank Nucleotide ID NM_001181905.1;
Protein Name Nucleoporin POM34
Protein Synonyms/Alias Nuclear pore protein POM34;Pore membrane protein POM34;
Gene Name POM34
Gene Synonyms/Alias YLR018C;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)		 Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors.
Phosphorylation Sites
 dbPAF PTMs: 7
PositionPeptidesSourceReferences ( PMIDs )
221YLFKGLETPLKARQRPhosphoGRID 2.0;curated19779198; 22817900
263GISSTLVSANNDNNScurated24961812
270SANNDNNSPHTPVTRPhosphoGRID 2.0;PHOSIDA;PhosphoPep 2.0;UniProt;curated19779198; 21081558; 19060867; 26040289; 22817900; 24961812
273NDNNSPHTPVTRKGYdbPTM 3.0;PhosphoGRID 2.0;PHOSIDA;PhosphoPep 2.0;SysPTM 2.0;UniProt;curated17330950; 16381945; 23193290; 19779198; 21081558; 19060867;
276NSPHTPVTRKGYIPSPhosphoGRID 2.0;PhosphoPep 2.019779198; 19060867
292KYAYMMNSQSPRGKIdbPTM 3.0;PhosphoGRID 2.0;SysPTM 2.0;UniProt;curated11875433; 16381945; 23193290; 19684113; 19823750; 19779198;
294AYMMNSQSPRGKI--dbPTM 3.0;PhosphoGRID 2.0;PhosphoPep 2.0;SysPTM 2.0;UniProt;curated11875433; 15665377; 17287358; 18407956; 16381945; 23193290;
Sequence
(Fasta)		MKIQAGQLGL DDNDVPGPLP DTDSKPSSQS QNDTPMFKLG NFESPVLKEL SRRTVNKEME 60
TQRIMTNVIA FAFWNLLVKF IKFFWNNTHV GRQFCNRLSR IHLYMLTFHT LKKANIIYHT 120
TFSWLNAELL DYLFHLLISL NILFSLWKLL STVKVSDLNL TDRQKKLLGV DMQSSVDTGL 180
QPQHPHYVST SKISQMAQNK THIPQTNLKN HPAYLFKGLE TPLKARQREM AEEQTKLQSQ 240
SLHTKNVFGT LQRHSGISST LVSANNDNNS PHTPVTRKGY IPSSKYAYMM NSQSPRGKI 300
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0509--mRNA transport
KW-0906--Nuclear pore complex
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0811--Translocation
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0813--Transport
Interpro

IPR012578--Nucl_pore_cmplx
PROSITE
Pfam

PF08058--NPCC
Gene Ontology

GO:0031309--C:integral component of nuclear outer membrane
GO:0005643--C:nuclear pore
GO:0070762--C:nuclear pore transmembrane ring
GO:0017056--F:structural constituent of nuclear pore
GO:0051028--P:mRNA transport
GO:0006999--P:nuclear pore organization
GO:0006606--P:protein import into nucleus
GO:0030474--P:spindle pole body duplication