dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0016639
Uniprot Accession Q12383; TRM13_YEAST; D6W1U3;
Genbank Protein ID NP_014516.1;
Genbank Nucleotide ID NM_001183379.2;
Protein Name tRNA:m(4)X modification enzyme TRM13
Protein Synonyms/Alias tRNA methylase 13;
Gene Name TRM13
Gene Synonyms/Alias YOL125W;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)
tRNA methylase which 2'-O-methylates cytidine(4) in tRNA(Pro) and tRNA(Gly)(GCC), and adenosine(4) in tRNA(His).
Phosphorylation Sites
dbPAF PTMs: 1
PositionPeptidesSourceReferences ( PMIDs )
266FSEIKSNSPSKPISCdbPTM 3.0;PhosphoGRID 2.0;PhosphoPep 2.0;SysPTM 2.0;curated18407956; 16381945; 23193290; 19060867; 19366988
Sequence
(Fasta)
MLQDNNGPAV KRAKPSERLQ CEYFMEKKKR RCGMTRSSQN LYCSEHLNLM KKAANSQVHN 60
KNGSEAEKER ERVPCPLDPN HTVWADQLKK HLKKCNKTKL SHLNDDKPYY EPGYNGENGL 120
LSSSVKIDIT AEHLVQSIEL LYKVFEGESM DELPLRQLNN KLMSLKRFPQ LPSNTKHAVQ 180
QSSLIENLVD AGAFERPESL NFIEFGCGRA EFSRYVSLYL LTQLTSLPAE HSGSNSNEFV 240
LIDRATNRMK FDKKIKDDFS EIKSNSPSKP ISCPSIKRIK IDIRDLKMDP ILKSTPGDDI 300
QYVCISKHLC GVATDLTLRC IGNSSILHGD DNNGCNPKLK AICIAMCCRH VCDYGDYVNR 360
SYVTSLVEKY RAHGSILTYE TFFRVLTKLC SWGTCGRKPG TAITDIVNVV ESFEGAEPYT 420
ITIKERENIG LMARRVIDEG RLVYVKEKFT EFNAELIRYV ESDVSLENVA MLVYKK 477
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0479--Metal-binding
KW-0489--Methyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0949--S-adenosyl-L-methionine
KW-0808--Transferase
KW-0819--tRNA processing
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR007871--Methyltransferase_TRM13
IPR022776--TRM13/UPF0224_CHHC_Znf_dom
IPR021721--Znf_CCCH-type_TRM13

PROSITE
Pfam

PF05206--TRM13
PF11722--zf-TRM13_CCCH
PF05253--zf-U11-48K

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0046872--F:metal ion binding
GO:0008175--F:tRNA methyltransferase activity
GO:0030488--P:tRNA methylation