dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0016614
Uniprot Accession Q12339; UTP23_YEAST; D6W270;
Genbank Protein ID NP_014646.1;
Genbank Nucleotide ID NM_001183423.1;
Protein Name rRNA-processing protein UTP23
Protein Synonyms/Alias U three protein 23;U3 small nucleolar RNA-associated protein 23;U3 snoRNA-associated protein 23;
Gene Name UTP23
Gene Synonyms/Alias YOR004W;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)		 Involved in rRNA-processing and ribosome biogenesis.
Phosphorylation Sites
 dbPAF PTMs: 4
PositionPeptidesSourceReferences ( PMIDs )
182NIEKLQESGDGSGKEdbPTM 3.0;SysPTM 2.0;UniProt;curated18407956; 16381945; 23193290; 19366988; 25315811
186LQESGDGSGKESITKcurated25315811
215KKKKKVNSPSDEVKDdbPTM 3.0;PhosphoGRID 2.0;SysPTM 2.0;curated18407956; 16381945; 23193290; 19779198; 19366988; 22817900;
217KKKVNSPSDEVKDKEcurated26040289; 25315811
Sequence
(Fasta)		MRQKRAKSYR KQLLVYSHTF KFREPYQVLV DNQLVLECNN SNFNLPSGLK RTLQADVKVM 60
ITQCCIQALY ETRNDGAINL AKQFERRRCN HSFKDPKSPA ECIESVVNIS GANKHRYVVA 120
SQDIDLRRKL RTVPGVPLIH LTRSVMVMEP LSTASAKASK ITEEQKLYKG LNDPNIEKLQ 180
ESGDGSGKES ITKKRKLGPK APNPLSVKKK KKVNSPSDEV KDKEDTSKEK KKRRRRKHKS 240
NTNVPVSNGT TAAQ 255
Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-0496--Mitochondrion
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0690--Ribosome biogenesis
KW-0694--RNA-binding
KW-0698--rRNA processing
Interpro

IPR006984--Fcf1/Utp23
IPR029060--PIN_domain-like
PROSITE
Pfam

PF04900--Fcf1
Gene Ontology

GO:0005739--C:mitochondrion
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0070181--F:small ribosomal subunit rRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5
8S rRNA, L--U-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5
8S rRNA an-- LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5
8S rRNA, L--U-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5
8S rRNA, L--U-rRNA)
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5
8S rRNA, L--U-rRNA)