dbPAF Protein Information
| Tag | Content | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| dbPAF ID | dbPAF-0016548 | ||||||||
| Uniprot Accession | Q12208; USB1_YEAST; D6VYC7; | ||||||||
| Genbank Protein ID | NP_013233.1; | ||||||||
| Genbank Nucleotide ID | NM_001182019.1; | ||||||||
| Protein Name | U6 snRNA phosphodiesterase | ||||||||
| Protein Synonyms/Alias | U six biogenesis protein 1; | ||||||||
| Gene Name | USB1 | ||||||||
| Gene Synonyms/Alias | YLR132C;L3127; | ||||||||
| Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast) | ||||||||
| NCBI Taxa ID | 559292 | ||||||||
| Functional Description (View all) |
Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA 3' end-terminated with a 3'phosphate. Could be involved in aerobic respiration. | ||||||||
| Phosphorylation Sites |
dbPAF PTMs: 1
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| Sequence (Fasta) | MEFISADYSS SDGSDTESES SNKSEVQIEY TEKTCIQKAD STDLPAIPDS IILKYHIPPN 60 LQKYEHQDMN MSRFWRSFTY FEWRPTPAIH RQLQKIICKY KETFMKQEYT NPYQLVDFDP 120 LFISHLGAPK PLHVSLTRSL LFETEEQRHV FIQEMRNGLR NNEITPFKLQ ICSYPKLYIS 180 ERANTLYLGL PVSECPNKAQ ISPFKTIIAE ALQKSGISNY QDLIVSRQNL HVSIAIASNP 240 SKATLKRYQQ LNETMGALLL LNNDFAYKLE FLVNSIYCDE NRHSIRIPFN 291 |
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| Keyword | KW-0181--Complete proteome |
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| Interpro | IPR027521--Usb1 |
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| PROSITE | |||||||||
| Pfam | PF09749--HVSL |
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| Gene Ontology | GO:0005739--C:mitochondrion |