dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0016487
Uniprot Accession Q12104; SWT1_YEAST; D6W2M4;
Genbank Protein ID NP_014809.3;
Genbank Nucleotide ID NM_001183585.3;
Protein Name Transcriptional protein SWT1
Protein Synonyms/Alias Synthetically lethal with TREX protein 1;
Gene Name SWT1
Gene Synonyms/Alias YOR166C;O3595;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)
Involved in transcription. Probably functions as a transcriptional activator.
Phosphorylation Sites
dbPAF PTMs: 3
PositionPeptidesSourceReferences ( PMIDs )
19NNHIRSETFNGSVSHcurated22817900; 24961812; 19547744
401IKKNEWKSLPTVLKSPhosphoGRID 2.021126336
404NEWKSLPTVLKSKPTcurated25882841
Sequence
(Fasta)
MTDEKRAFPK GNNHIRSETF NGSVSHKISE SIKDIASLRP HGKYTVQDID NIIASTSSHE 60
NRGQSGDSNG CINHDEEGDI PMCDLNDESD VEMISEYLSS QREMEAQSVA NYMPKINDDL 120
PLLNPPTLKT AFVVDTNFII SHLNTLEKLR SLSSTYHHLI IVPTTVIQEL DGLKKSPDIA 180
RDNDDTTNQE HDRTIGTLAR WGNDWIYKNL ANLDSGLIGQ KLKQSLNPGS LKDDSILDCC 240
LYFKEILNCF VILLSNDKNL CTKALTEDIL TVSFRKNMDA KIIAMRAYEE NQLRFANLRD 300
STVNNFDQNV TSYAHIPGIE TPPLQFDKVS QNVFEQVKET IFFAIDHTLR KEYGEDIGFI 360
DYNPDKLTTI ENASNYIYLF WVSVFSELFT CSKIKKNEWK SLPTVLKSKP TNLNDLRTFE 420
QFWETVLHFL FSKFTNEEKQ SLEKQIHEWK TSINAIST 459
Keyword

KW-0002--3D-structure
KW-0010--Activator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR002716--PIN_dom
IPR029060--PIN_domain-like

PROSITE
Pfam

PF13638--PIN_4

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004521--F:endoribonuclease activity
GO:0071032--P:nuclear mRNA surveillance of mRNP export
GO:0006355--P:regulation of transcription, DNA-templated
GO:0090502--P:RNA phosphodiester bond hydrolysis, endonucleolytic
GO:0006351--P:transcription, DNA-templated