dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0006079
Uniprot Accession P15646; FBRL_YEAST; D6VRX5; P89890;
Genbank Protein ID NP_010270.1;
Genbank Nucleotide ID NM_001180073.1;
Protein Name rRNA 2'-O-methyltransferase fibrillarin
Protein Synonyms/Alias Histone-glutamine methyltransferase;U3 small nucleolar RNA-associated protein NOP1;Nucleolar protein 1;U3 snoRNA-associated protein NOP1;
Gene Name NOP1
Gene Synonyms/Alias LOT3;YDL014W;D2870;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)
S-adenosyl-L-methionine-dependent methyltransferase that has the ability to methylate both RNAs and proteins. Involved in pre-rRNA processing by catalyzing the site-specific 2'-hydroxyl methylation of ribose moieties in pre-ribosomal RNA (PubMed:1825809). Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA. Involved in the biogenesis of the 18S rRNA. Also acts as a protein methyltransferase by mediating methylation of 'Gln-105' of histone H2A (H2AQ105me), a modification that impairs binding of the FACT complex and is specifically present at 35S ribosomal DNA locus (PubMed:24352239).
Phosphorylation Sites
dbPAF PTMs: 5
PositionPeptidesSourceReferences ( PMIDs )
15RGGSRGGSRGGFGGRcurated22817900
33RGGARGGSRGGFGGRPhosphoGRID 2.017563356
69RGGARGGSRGGRGGAdbPTM 3.0;curated17563356; 16381945; 23193290; 22817900
116KNMAPGESVYGEKRIcurated22817900; 19547744
124VYGEKRISVEEPSKEcurated25315811
Sequence
(Fasta)
MSFRPGSRGG SRGGSRGGFG GRGGSRGGAR GGSRGGFGGR GGSRGGARGG SRGGFGGRGG 60
SRGGARGGSR GGRGGAAGGA RGGAKVVIEP HRHAGVYIAR GKEDLLVTKN MAPGESVYGE 120
KRISVEEPSK EDGVPPTKVE YRVWNPFRSK LAAGIMGGLD ELFIAPGKKV LYLGAASGTS 180
VSHVSDVVGP EGVVYAVEFS HRPGRELISM AKKRPNIIPI IEDARHPQKY RMLIGMVDCV 240
FADVAQPDQA RIIALNSHMF LKDQGGVVIS IKANCIDSTV DAETVFAREV QKLREERIKP 300
LEQLTLEPYE RDHCIVVGRY MRSGLKK 328
Keyword

KW-0181--Complete proteome
KW-0903--Direct protein sequencing
KW-0488--Methylation
KW-0489--Methyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0690--Ribosome biogenesis
KW-0694--RNA-binding
KW-0698--rRNA processing
KW-0949--S-adenosyl-L-methionine
KW-0808--Transferase

Interpro

IPR000692--Fibrillarin
IPR020813--Fibrillarin_CS
IPR029063--SAM-dependent_MTases

PROSITE

PS00566--FIBRILLARIN

Pfam

PF01269--Fibrillarin

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0015030--C:Cajal body
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:1990259--F:histone-glutamine methyltransferase activity
GO:0003723--F:RNA binding
GO:0008649--F:rRNA methyltransferase activity
GO:0000494--P:box C/D snoRNA 3'-end processing
GO:1990258--P:histone glutamine methylation
GO:0006356--P:regulation of transcription from RNA polymerase I promoter
GO:0031167--P:rRNA methylation
GO:0006364--P:rRNA processing
GO:0043144--P:snoRNA processing
GO:0008033--P:tRNA processing