dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0005745
Uniprot Accession P13433; RPOM_YEAST; D6VTJ4;
Genbank Protein ID NP_116617.1;
Genbank Nucleotide ID NM_001179930.1;
Protein Name DNA-directed RNA polymerase, mitochondrial
Protein Synonyms/Alias
Gene Name RPO41
Gene Synonyms/Alias YFL036W;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)		 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
Phosphorylation Sites
 dbPAF PTMs: 4
PositionPeptidesSourceReferences ( PMIDs )
301LHKASNASSDSIKKPcurated25315811
302HKASNASSDSIKKPScurated22817900; 19547744
304ASNASSDSIKKPSLDcurated22817900; 19547744
732GLNVLGRTPWTVNRKcurated25315811
Sequence
(Fasta)		MLRPAYKSLV KTSLLQRRLI SSKGSKLFKP SPDSTSTILI SEDPLVTGSS PTSSTTSGII 60
SSNDFPLFNK NRKDAKSSIS YQWKNPSELE FDPFNKSHAS AVTSMTRTRD VMQLWSLLEA 120
CLQSNLMKRA FSILESLYLV PEHKQRFIED YNMYLNSFSK NDPNFPILKM NEKLTNDLET 180
SFKDVNYNDK TLAIMIHHAL NFHSTTSSML LKPIISAYLK MSVNGIREIF SCLDILTISD 240
LNILMNDLKV ITPSQLPNSV RPILESLTLS PTPVNNIENE EGLNKVEAEN DSKLHKASNA 300
SSDSIKKPSL DPLREVSFHG STEVLSKDAE KLIAVDTIGM RVIRHTLLGL SLTPEQKEQI 360
SKFKFDANDN VLKMKPTKND DNNNSINFFE IYNSLPTLEE KKAFESALNI FNQDRQKVLE 420
NRATEAARER WKHDFEEAKA RGDISIEKNL NVKLWKWYNE MLPLVKEEIN HCRSLLSEKL 480
SDKKGLNKVD TNRLGYGPYL TLIDPGKMCV ITILELLKLN STGGVIEGMR TARAVISVGK 540
AIEMEFRSEQ VLKSESQAFR DVNKKSPEFK KLVQNAKSVF RSSQIEQSKI LWPQSIRARI 600
GSVLISMLIQ VAKVSVQGVD PVTKAKVHGE APAFAHGYQY HNGSKLGVLK IHKTLIRQLN 660
GERLIASVQP QLLPMLVEPK PWVNWRSGGY HYTQSTLLRT KDSPEQVAYL KAASDNGDID 720
RVYDGLNVLG RTPWTVNRKV FDVVSQVWNK GEGFLDIPGA QDEMVLPPAP PKNSDPSILR 780
AWKLQVKTIA NKFSSDRSNR CDTNYKLEIA RAFLGEKLYF PHNLDFRGRA YPLSPHFNHL 840
GNDMSRGLLI FWHGKKLGPS GLKWLKIHLS NLFGFDKLPL KDRVAFTESH LQDIKDSAEN 900
PLTGDRWWTT ADKPWQALAT CFELNEVMKM DNPEEFISHQ PVHQDGTCNG LQHYAALGGD 960
VEGATQVNLV PSDKPQDVYA HVARLVQKRL EIAAEKGDEN AKILKDKITR KVVKQTVMTN 1020
VYGVTYVGAT FQIAKQLSPI FDDRKESLDF SKYLTKHVFS AIRELFHSAH LIQDWLGESA 1080
KRISKSIRLD VDEKSFKNGN KPDFMSSVIW TTPLGLPIVQ PYREESKKQV ETNLQTVFIS 1140
DPFAVNPVNA RRQKAGLPPN FIHSLDASHM LLSAAECGKQ GLDFASVHDS YWTHASDIDT 1200
MNVVLREQFI KLHEVDLVLR LKEEFDQRYK NYVKIGKLKR STDLAQKIIR IRKDLSRKLG 1260
RSTTLADEIY FEKKRQELLN SPLIEDRNVG EKMVTTVSLF EDITDLDALE LENGGDENSG 1320
MSVLLPLRLP EIPPKGDFDV TVLRNSQYFF S 1352
Keyword

KW-0181--Complete proteome
KW-0240--DNA-directed RNA polymerase
KW-0496--Mitochondrion
KW-0548--Nucleotidyltransferase
KW-1185--Reference proteome
KW-0804--Transcription
KW-0808--Transferase
KW-0809--Transit peptide
Interpro

IPR024075--DNA-dir_RNA_pol_helix_hairpin
IPR002092--DNA-dir_Rpol_phage-type
IPR029262--RPOL_N
PROSITE

PS00900--RNA_POL_PHAGE_1
PS00489--RNA_POL_PHAGE_2
Pfam

PF00940--RNA_pol
PF14700--RPOL_N
Gene Ontology

GO:0034245--C:mitochondrial DNA-directed RNA polymerase complex
GO:0005759--C:mitochondrial matrix
GO:0042645--C:mitochondrial nucleoid
GO:0003677--F:DNA binding
GO:0003896--F:DNA primase activity
GO:0003899--F:DNA-directed RNA polymerase activity
GO:0006269--P:DNA replication, synthesis of RNA primer
GO:0000002--P:mitochondrial genome maintenance
GO:0006390--P:transcription from mitochondrial promoter