Tag |
Content |
dbPAF ID |
dbPAF-0005573 |
Uniprot Accession |
P11938; RAP1_YEAST; D6W0X4; |
Genbank Protein ID |
NP_014183.1; |
Genbank Nucleotide ID |
NM_001183054.1; |
Protein Name |
DNA-binding protein RAP1 |
Protein Synonyms/Alias |
Repressor/activator site-binding protein;SBF-E;TUF; |
Gene Name |
RAP1 |
Gene Synonyms/Alias |
GRF1;TUF1;YNL216W;N1310; |
Organism |
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast) |
NCBI Taxa ID |
559292 |
Functional Description (View all) |
Essential regulatory protein in yeast whose DNA-binding sites are found at three types of chromosomal elements: promoters, silencers, and telomeres. RAP1 is also involved in the regulation of telomere structure, where its binding sites are found within the terminal poly[C(1-3)A] sequences. The opposite regulatory functions of RAP1 are not intrinsic to its binding sites but, instead, result from interactions with different factors at promoters and silencers. RAP1 associates with SIR3 and SIR4 proteins to form a DNA-binding complex that initiates the repression at the HM loci and telomeres. May also target the binding of RIF1 and RIF2 to silencers and telomeres. Forms with GCR1 a transcriptional activation complex that is required for expression of glycolytic and ribosomal gene.Functional Description
Essential regulatory protein in yeast whose DNA-binding sites are found at three types of chromosomal elements: promoters, silencers, and telomeres. RAP1 is also involved in the regulation of telomere structure, where its binding sites are found within the terminal poly[C(1-3)A] sequences. The opposite regulatory functions of RAP1 are not intrinsic to its binding sites but, instead, result from interactions with different factors at promoters and silencers. RAP1 associates with SIR3 and SIR4 proteins to form a DNA-binding complex that initiates the repression at the HM loci and telomeres. May also target the binding of RIF1 and RIF2 to silencers and telomeres. Forms with GCR1 a transcriptional activation complex that is required for expression of glycolytic and ribosomal gene.
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Phosphorylation Sites
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dbPAF PTMs: 16 |
Sequence (Fasta) | MSSPDDFETA PAEYVDALDP SMVVVDSGSA AVTAPSDSAA EVKANQNEEN TGATAAETSE 60 KVDQTEVEKK DDDDTTEVGV TTTTPSIADT AATANIASTS GASVTEPTTD DTAADEKKEQ 120 VSGPPLSNMK FYLNRDADAH DSLNDIDQLA RLIRANGGEV LDSKPRESKE NVFIVSPYNH 180 TNLPTVTPTY IKACCQSNSL LNMENYLVPY DNFREVVDSR LQEESHSNGV DNSNSNSDNK 240 DSIRPKTEII STNTNGATED STSEKVMVDA EQQARLQEQA QLLRQHVSST ASITSGGHND 300 LVQIEQPQKD TSNNNNSNVN DEDNDLLTQD NNPQTADEGN ASFQAQRSMI SRGALPSHNK 360 ASFTDEEDEF ILDVVRKNPT RRTTHTLYDE ISHYVPNHTG NSIRHRFRVY LSKRLEYVYE 420 VDKFGKLVRD DDGNLIKTKV LPPSIKRKFS ADEDYTLAIA VKKQFYRDLF QIDPDTGRSL 480 ITDEDTPTAI ARRNMTMDPN HVPGSEPNFA AYRTQSRRGP IAREFFKHFA EEHAAHTENA 540 WRDRFRKFLL AYGIDDYISY YEAEKAQNRE PEPMKNLTNR PKRPGVPTPG NYNSAAKRAR 600 NYSSQRNVQP TANAASANAA AAAAAAASNS YAIPENELLD EDTMNFISSL KNDLSNISNS 660 LPFEYPHEIA EAIRSDFSNE DIYDNIDPDT ISFPPKIATT DLFLPLFFHF GSTRQFMDKL 720 HEVISGDYEP SQAEKLVQDL CDETGIRKNF STSILTCLSG DLMVFPRYFL NMFKDNVNPP 780 PNVPGIWTHD DDESLKSNDQ EQIRKLVKKH GTGRMEMRKR FFEKDLL
828Fasta Sequence
>P11938|RAP1|Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast) MSSPDDFETAPAEYVDALDPSMVVVDSGSAAVTAPSDSAAEVKANQNEENTGATAAETSEKVDQTEVEKKDDDDTTEVGVTTTTPSIADTAATANIASTSGASVTEPTTDDTAADEKKEQVSGPPLSNMKFYLNRDADAHDSLNDIDQLARLIRANGGEVLDSKPRESKENVFIVSPYNHTNLPTVTPTYIKACCQSNSLLNMENYLVPYDNFREVVDSRLQEESHSNGVDNSNSNSDNKDSIRPKTEIISTNTNGATEDSTSEKVMVDAEQQARLQEQAQLLRQHVSSTASITSGGHNDLVQIEQPQKDTSNNNNSNVNDEDNDLLTQDNNPQTADEGNASFQAQRSMISRGALPSHNKASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDGNLIKTKVLPPSIKRKFSADEDYTLAIAVKKQFYRDLFQIDPDTGRSLITDEDTPTAIARRNMTMDPNHVPGSEPNFAAYRTQSRRGPIAREFFKHFAEEHAAHTENAWRDRFRKFLLAYGIDDYISYYEAEKAQNREPEPMKNLTNRPKRPGVPTPGNYNSAAKRARNYSSQRNVQPTANAASANAAAAAAAAASNSYAIPENELLDEDTMNFISSLKNDLSNISNSLPFEYPHEIAEAIRSDFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNVNPPPNVPGIWTHDDDESLKSNDQEQIRKLVKKHGTGRMEMRKRFFEKDLL
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Keyword |
KW-0002--3D-structure KW-0010--Activator KW-0158--Chromosome KW-0181--Complete proteome KW-0238--DNA-binding KW-0539--Nucleus KW-0597--Phosphoprotein KW-1185--Reference proteome KW-0678--Repressor KW-0779--Telomere KW-0804--Transcription KW-0805--Transcription regulation
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Interpro |
IPR001357--BRCT_dom IPR009057--Homeodomain-like IPR017930--Myb_dom IPR021661--Rap1_C IPR015280--Rap1_DNA-bd IPR001005--SANT/Myb
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PROSITE |
PS50172--BRCT PS51294--HTH_MYB
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Pfam |
PF16589--BRCT_2 PF00249--Myb_DNA-binding PF09197--Rap1-DNA-bind PF11626--Rap1_C
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Gene Ontology |
GO:0005829--C:cytosol GO:0000228--C:nuclear chromosome GO:0000784--C:nuclear chromosome, telomeric region GO:0005634--C:nucleus GO:0070187--C:telosome GO:0000987--F:core promoter proximal region sequence-specific DNA binding GO:0008301--F:DNA binding, bending GO:0051880--F:G-quadruplex DNA binding GO:0031492--F:nucleosomal DNA binding GO:0001132--F:RNA polymerase II transcription factor activity, TBP-class protein binding RNA GO:0042162--F:telomeric DNA binding GO:0001094--F:TFIID-class transcription factor binding GO:0000982--F:transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding GO:0001076--F:transcription factor activity, RNA polymerase II transcription factor binding GO:0030466--P:chromatin silencing at silent mating-type cassette GO:0006348--P:chromatin silencing at telomere GO:0035390--P:establishment of chromatin silencing at telomere GO:0071169--P:establishment of protein localization to chromatin GO:0070200--P:establishment of protein localization to telomere GO:0071919--P:G-quadruplex DNA formation GO:0031936--P:negative regulation of chromatin silencing GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter GO:0031848--P:protection from non-homologous end joining at telomere GO:0072363--P:regulation of glycolytic process by positive regulation of transcription from RNA polymerase II promoter GO:0000723--P:telomere maintenance GO:0010833--P:telomere maintenance via telomere lengthening GO:0006351--P:transcription, DNA-templated
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