dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0005532
Uniprot Accession P11632; NHP6A_YEAST; D6W459;
Genbank Protein ID NP_015377.1;
Genbank Nucleotide ID NM_001184149.1;
Protein Name Non-histone chromosomal protein 6A
Protein Synonyms/Alias
Gene Name NHP6A
Gene Synonyms/Alias NHPA;YPR052C;YP9499.09C;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)
DNA-binding protein that induces severe bending of DNA. Required for DNA-binding by the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. Also augments the fidelity of transcription by RNA polymerase III independently of any role in the FACT complex. Required for transcriptional initiation fidelity of some but not all tRNA genes. Seems to be functionally redundant with NHP6B.
Phosphorylation Sites
dbPAF PTMs: 3
PositionPeptidesSourceReferences ( PMIDs )
26NAPKRALSAYMFFANPhosphoGRID 2.021126336
47RSENPDITFGQVGKKcurated22369663
63GEKWKALTPEEKQPYPhosphoGRID 2.021126336
Sequence
(Fasta)
MVTPREPKKR TTRKKKDPNA PKRALSAYMF FANENRDIVR SENPDITFGQ VGKKLGEKWK 60
ALTPEEKQPY EAKAQADKKR YESEKELYNA TLA 94
Keyword

KW-0002--3D-structure
KW-0158--Chromosome
KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR009071--HMG_box_dom

PROSITE

PS50118--HMG_BOX_2

Pfam

PF00505--HMG_box

Gene Ontology

GO:0005694--C:chromosome
GO:0005634--C:nucleus
GO:0008301--F:DNA binding, bending
GO:0031491--F:nucleosome binding
GO:0006338--P:chromatin remodeling
GO:0034724--P:DNA replication-independent nucleosome organization
GO:0001195--P:maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase III promoter
GO:0006298--P:mismatch repair
GO:0006355--P:regulation of transcription, DNA-templated
GO:0051123--P:RNA polymerase II transcriptional preinitiation complex assembly
GO:0070898--P:RNA polymerase III transcriptional preinitiation complex assembly