dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0004972
Uniprot Accession P09798; CDC16_YEAST; D6VXR3;
Genbank Protein ID NP_012903.1;
Genbank Nucleotide ID NM_001179588.1;
Protein Name Anaphase-promoting complex subunit CDC16
Protein Synonyms/Alias Cell division control protein 16;
Gene Name CDC16
Gene Synonyms/Alias YKL022C;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)
Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C is thought to confer substrate specificity and, in the presence of ubiquitin-conjugating E2 enzymes, it catalyzes the formation of protein-ubiquitin conjugates that are subsequently degraded by the 26S proteasome. In early mitosis, the APC/C is activated by CDC20 and targets securin PDS1, the B-type cyclin CLB5, and other anaphase inhibitory proteins for proteolysis, thereby triggering the separation of sister chromatids at the metaphase-to-anaphase transition. In late mitosis and in G1, degradation of CLB5 allows activation of the APC/C by CDH1, which is needed to destroy CDC20 and the B-type cyclin CLB2 to allow exit from mitosis and creating the low CDK state necessary for cytokinesis and for reforming prereplicative complexes in G1 prior to another round of replication.
Phosphorylation Sites
dbPAF PTMs: 15
PositionPeptidesSourceReferences ( PMIDs )
44VLMRNPMSPSEQHSQPhosphoGRID 2.0;PhosphoPep 2.010871279; 19060867
54EQHSQHNSTLAASPFPhosphoPep 2.019060867
59HNSTLAASPFVSNVSPhosphoGRID 2.010871279
95NRTNTATSPYQSLANPhosphoGRID 2.0;curated10871279; 26040289
103PYQSLANSPLIQKLQPhosphoGRID 2.0;PhosphoPep 2.0;curated10871279; 19060867; 26040289
115KLQANIMTPHQPSANPhosphoGRID 2.010871279
148LASMSKNSMFGSTIPcurated24603354; 23825934
152SKNSMFGSTIPSTLRcurated22817900
157FGSTIPSTLRKVSLQPhosphoPep 2.0;curated19060867; 24603354; 23825934
406LLSKNLLTPQEEWDLPhosphoGRID 2.010871279
447YINTEDITKSNEILAcurated22817900
770SHPLIDKSNLMSQASPhosphoGRID 2.0;curated19779198; 22817900
789SLNKKRSSLTYDPVNdbPTM 3.0;PhosphoGRID 2.0;SysPTM 2.0;curated18407956; 16381945; 23193290; 19366988; 22817900; 20377248;
791NKKRSSLTYDPVNMAcurated25315811
792KKRSSLTYDPVNMAKcurated25315811
Sequence
(Fasta)
MKFCLYCCHC YIVICGKATH YYKSSKATSN LKSSNRVLMR NPMSPSEQHS QHNSTLAASP 60
FVSNVSAART QQSLPTDAQN DRLQQPWNRT NTATSPYQSL ANSPLIQKLQ ANIMTPHQPS 120
ANSNSNSNSI TGNVVNDNNL LASMSKNSMF GSTIPSTLRK VSLQREYKDS VDGVVRDEDN 180
DEDVHNNGDA AANANNDRES KLGHNGPLTT TTLTTTTTAT QLDVSELSAI ERLRLWRFDA 240
LMQHMYRTAE YIADKVYNIS NDPDDAFWLG QVYYNNNQYV RAVELITRNN LDGVNILCRY 300
LLGLSFVKLQ RFDDALDVIG EYNPFSEDPS TTAANTMSNN GNNSNTSQPV TDGGIKMESS 360
LCFLRGKIYF AQNNFNKARD AFREAILVDI KNFEAFEMLL SKNLLTPQEE WDLFDSLDFK 420
EFGEDKEIMK NLYKINLSKY INTEDITKSN EILAKDYKLA DNVDVVRSKV DICYTQCKFN 480
ECLELCETVL ENDEFNTNIL PAYIGCLYEL SNKNKLFLLS HRLAETFPKS AITWFSVATY 540
YMSLDRISEA QKYYSKSSIL DPSFAAAWLG FAHTYALEGE QDQALTAYST ASRFFPGMHL 600
PKLFLGMQFM AMNSLNLAES YFVLAYDICP NDPLVLNEMG VMYFKKNEFV KAKKYLKKAL 660
EVVKDLDPSS RTTISIQLNL GHTYRKLNEN EIAIKCFRCV LEKNDKNSEI HCSLGYLYLK 720
TKKLQKAIDH LHKSLYLKPN NSSATALLKN ALELNVTLSL DASHPLIDKS NLMSQASKDK 780
ASLNKKRSSL TYDPVNMAKR LRTQKEIFDQ NNKALRKGGH DSKTGSNNAD DDFDADMELE 840
841
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-0498--Mitosis
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat
KW-0833--Ubl conjugation pathway

Interpro

IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR001440--TPR_1
IPR013105--TPR_2
IPR019734--TPR_repeat

PROSITE

PS50005--TPR
PS50293--TPR_REGION

Pfam

PF00515--TPR_1
PF13414--TPR_11
PF07719--TPR_2

Gene Ontology

GO:0005680--C:anaphase-promoting complex
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0031145--P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0051301--P:cell division
GO:0007067--P:mitotic nuclear division
GO:0032297--P:negative regulation of DNA-dependent DNA replication initiation
GO:0016567--P:protein ubiquitination