Tag |
Content |
dbPAF ID |
dbPAF-0004872 |
Uniprot Accession |
P09085; CAD_DROME; A4V0Y1; D4G7D2; Q9VIJ6; |
Genbank Protein ID |
NP_476954.1; NP_599128.1; |
Genbank Nucleotide ID |
NM_057606.6; NM_134301.4; |
Protein Name |
Homeotic protein caudal |
Protein Synonyms/Alias |
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Gene Name |
cad |
Gene Synonyms/Alias |
CG1759; |
Organism |
Drosophila melanogaster(Fruit fly) |
NCBI Taxa ID |
7227 |
Functional Description (View all) |
Caudal (cad) is one of a number of transcription factors controlling segmentation of the embryo. Further transcriptional regulation via a 5' flanking region containing DNA replication-related elements (DRE) and by dref also regulated by trh and tgo via the CNS midline element. Alongside Bicoid (bcd), caudal forms concentration gradients down the anterior-posterior (A-P) axis providing positional information and subsequent induction of the gap genes. Plays a role in gastrulation/germ band extension, hindgut morphogenesis, positive regulation of cell proliferation, genital disk development and pattern formation. Acts as a key regulator of the Hox gene network and activates transcription via the downstream core promoter element (DPE) relative to the TATA box. Plays a role in the establishment of the hindgut and in the invagination of the hindgut primordium during gastrulation. These effects on the gut are achieved by acting combinatorially at the posterior of the embryo to activate transcription of different targets including fog, fkh and wg. Caudal is involved in regulation of proliferation through transactivation of the E2F gene. Postembryonically its function is mostly restricted to the intestine where it regulates antimicrobial peptide (AMP) levels preserving the normal gut flora.Functional Description
Caudal (cad) is one of a number of transcription factors controlling segmentation of the embryo. Further transcriptional regulation via a 5' flanking region containing DNA replication-related elements (DRE) and by dref also regulated by trh and tgo via the CNS midline element. Alongside Bicoid (bcd), caudal forms concentration gradients down the anterior-posterior (A-P) axis providing positional information and subsequent induction of the gap genes. Plays a role in gastrulation/germ band extension, hindgut morphogenesis, positive regulation of cell proliferation, genital disk development and pattern formation. Acts as a key regulator of the Hox gene network and activates transcription via the downstream core promoter element (DPE) relative to the TATA box. Plays a role in the establishment of the hindgut and in the invagination of the hindgut primordium during gastrulation. These effects on the gut are achieved by acting combinatorially at the posterior of the embryo to activate transcription of different targets including fog, fkh and wg. Caudal is involved in regulation of proliferation through transactivation of the E2F gene. Postembryonically its function is mostly restricted to the intestine where it regulates antimicrobial peptide (AMP) levels preserving the normal gut flora.
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Phosphorylation Sites
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dbPAF PTMs: 1 Position | Peptides | Source | References ( PMIDs ) |
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245 | SVSNNNRTSPSKPPY | dbPTM 3.0;Phospho.ELM 9.0;UniProt | 18327897; 16381945; 23193290 |
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Sequence (Fasta) | MVSHYYNTLP YTQKHSAANL AYASAAGQPW NWTPNYHHTP PNHQFLGDVD SSHAAHHAAA 60 AHQMYYNSHH MFHSAAAASA GEWHSPASST ADNFVQNVPT SAHQLMQQHH HHHAHASSSS 120 ASSGSSSSGG APGAPQLNET NSSIGVGGAG GGGGVGGATD GGPGSAPPNH QQHIAEGLPS 180 PPITVSGSEI SSPGAPTSAS SPHHHLAHHL SAVANNNNNN NNNNNSPSTH NNNNNNNSVS 240 NNNRTSPSKP PYFDWMKKPA YPAQPQPGKT RTKDKYRVVY TDFQRLELEK EYCTSRYITI 300 RRKSELAQTL SLSERQVKIW FQNRRAKERK QNKKGSDPNV MGVGVQHADY SQLLDAKAKL 360 EPGLHLSHSL AHSMNPMAAM NIPAMRLHPH LAAHSHSLAA VAAHSHQLQQ QHSAQMSAAA 420 AVGTLSM
428Fasta Sequence
>P09085|cad|Drosophila melanogaster(Fruit fly) MVSHYYNTLPYTQKHSAANLAYASAAGQPWNWTPNYHHTPPNHQFLGDVDSSHAAHHAAAAHQMYYNSHHMFHSAAAASAGEWHSPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSSSASSGSSSSGGAPGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIPAMRLHPHLAAHSHSLAAVAAHSHQLQQQHSAQMSAAAAVGTLSM
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Keyword |
KW-0025--Alternative splicing KW-0181--Complete proteome KW-0217--Developmental protein KW-0238--DNA-binding KW-0306--Gastrulation KW-0371--Homeobox KW-0539--Nucleus KW-0597--Phosphoprotein KW-1185--Reference proteome KW-0804--Transcription KW-0805--Transcription regulation
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Interpro |
IPR017970--Homeobox_CS IPR001356--Homeobox_dom IPR020479--Homeobox_metazoa IPR009057--Homeodomain-like IPR000047--HTH_motif
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PROSITE |
PS00027--HOMEOBOX_1 PS50071--HOMEOBOX_2
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Pfam |
PF00046--Homeobox
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Gene Ontology |
GO:0005737--C:cytoplasm GO:0005634--C:nucleus GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding GO:0003700--F:transcription factor activity, sequence-specific DNA binding GO:0007487--P:analia development GO:0009948--P:anterior/posterior axis specification GO:0007350--P:blastoderm segmentation GO:0030154--P:cell differentiation GO:0010004--P:gastrulation involving germ band extension GO:0035224--P:genital disc anterior/posterior pattern formation GO:0035215--P:genital disc development GO:0007377--P:germ-band extension GO:0007442--P:hindgut morphogenesis GO:0007443--P:Malpighian tubule morphogenesis GO:0009887--P:organ morphogenesis GO:0002807--P:positive regulation of antimicrobial peptide biosynthetic process GO:0008284--P:positive regulation of cell proliferation GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter GO:0045893--P:positive regulation of transcription, DNA-templated GO:0007379--P:segment specification GO:0006351--P:transcription, DNA-templated
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