dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0004842
Uniprot Accession P08970; SUHW_DROME; Q0KI74; Q9VFK9;
Genbank Protein ID NP_001247098.1; NP_524349.1; NP_731897.1;
Genbank Nucleotide ID NM_001260169.2; NM_079625.3; NM_169574.2;
Protein Name Protein suppressor of hairy wing
Protein Synonyms/Alias
Gene Name su(Hw)
Gene Synonyms/Alias CG8573;
Organism Drosophila melanogaster(Fruit fly)
NCBI Taxa ID 7227
Functional Description
(View all)
Component of the gypsy chromatin insulator complex which is required for the function of the gypsy chromatin insulator and other endogenous chromatin insulators. Chromatin insulators are regulatory elements which establish independent domains of transcriptional activity within eukaryotic genomes. Insulators have two defining properties; they can block the communication between an enhancer and a promoter when placed between them and can also buffer transgenes from position effect variegation (PEV). Insulators are proposed to structure the chromatin fiber into independent domains of differing transcriptional potential by promoting the formation of distinct chromatin loops. This chromatin looping may involve the formation of insulator bodies, where homotypic interactions between individual subunits of the insulator complex could promote the clustering of widely spaced insulators at the nuclear periphery. Within the gypsy insulator complex, this protein binds specifically to a region of the gypsy element located 3' of the 5' long terminal repeat (LTR), and may also mediate interaction with other endogenous insulators at sites distinct from those recognized by Cp190.
Phosphorylation Sites
dbPAF PTMs: 9
PositionPeptidesSourceReferences ( PMIDs )
21LLGVENISPPKDKRPPHOSIDA;PhosphoPep 2.021081558; 19060867
65NKQEKRGSVAGSRIKPhosphoPep 2.019060867
186NGQEIVVTEDDEDLGdbPTM 3.0;Phospho.ELM 9.0;UniProt;curated18327897; 16381945; 23193290; 22817900
464KKHRRYHTGEKPYSCdbPTM 3.0;SysPTM 2.0;curated18327897; 16381945; 23193290; 19366988; 22817900
578HMDEGKHSPKQQRSSPhosphoPep 2.019060867
724KKEEAQVSPVVKKEQdbPTM 3.0;PHOSIDA;PhosphoPep 2.0;SysPTM 2.0;curated18327897; 16381945; 23193290; 21081558; 19060867; 19366988;
876GLDKDNESHSGDEEAPHOSIDA21081558
878DKDNESHSGDEEAVSPHOSIDA21081558
885SGDEEAVSVTGETKTPHOSIDA21081558
Sequence
(Fasta)
MSASKEGKEK KGKLLGVENI SPPKDKRPAT RMKLLNDVGA GEDSEASTTT TTSRTPSNKQ 60
EKRGSVAGSR IKILNEEILG TPKTEKRGAT KSTAPAASTV KILNEKKTPS ATVTAVETTK 120
IKTSPSKRKK MEHYVLQAVK SENTKADTTV TVVTEEDDTI DFILADDEEV VPGRIENNNG 180
QEIVVTEDDE DLGEDGDEDG EDSSGKGNSS QTKIKEIVEH VCGKCYKTFR RVQSLKKHLE 240
FCRYDSGYHL RKADMLKNLE KIEKDAVVME KKDICFCCSE SYDTFHLGHI NCPDCPKSFK 300
TQTSYERHIF ITHSEFSDFP CSICNANLRS EALLALHEEQ HKSRGKPYAC KICGKDFTRS 360
YHLKRHQKYS SCSSNETDTM SCKVCDRVFY RLDNLRSHLK QHLGTQVVKK PEYMCHTCKN 420
CFYSLSTLNI HIRTHTGEKP FDCDLCDKKF SALVALKKHR RYHTGEKPYS CTVCNQAFAV 480
KEVLNRHMKR HTGERPHKCD ECGKSFIQAT QLRTHSKTHI RPFPCEQCDE KFKTEKQLER 540
HVKTHSRTKR PVFSCAECKR NFRTPALLKE HMDEGKHSPK QQRSSMRSAV KIMERTDCAI 600
CDKNFDSSDT LRRHIRTVHE CDPDDIFGVE PHPSKRAKKD IESEEVVPVA LNTSAGSLIS 660
SQTDGNGVVV REFLVDEGDG AAQTITLENE TYTILPLDGA IEGEQLTDEA GVKPEAKKEE 720
AQVSPVVKKE QRKSLAASLA AAIADNLEES CSEDDFSGEI LTEEDIKLKE NVGKLIDMLV 780
DPPILKKYGW PNAPEETVLC KVIENCGHDL TKGGENYAEL DYGSRMREYC KLLFTVVIHN 840
DSIKSLLNNF PIDDVIEYVL GDEDQDEGGL DKDNESHSGD EEAVSVTGET KTNEIREKPE 900
KKEVSAKSEK KEIVGKAVDK DNSEEVVREN KKKPVGEQEK A 942
Keyword

KW-0156--Chromatin regulator
KW-0158--Chromosome
KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR007087--Znf_C2H2
IPR015880--Znf_C2H2-like
IPR013087--Znf_C2H2/integrase_DNA-bd

PROSITE

PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF13912--zf-C2H2_6

Gene Ontology

GO:0000785--C:chromatin
GO:0005634--C:nucleus
GO:0005700--C:polytene chromosome
GO:0043035--F:chromatin insulator sequence binding
GO:0003677--F:DNA binding
GO:0046872--F:metal ion binding
GO:0043565--F:sequence-specific DNA binding
GO:0016568--P:chromatin modification
GO:0031936--P:negative regulation of chromatin silencing
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated