dbPAF Protein Information
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dbPAF ID | dbPAF-0004496 | ||||||||||||||||||||||||||||||||||||
Uniprot Accession | P06844; SPT3_YEAST; D6VT26; Q70DE7; Q70DE9; Q70DF1; Q70DF2; | ||||||||||||||||||||||||||||||||||||
Genbank Protein ID | NP_010680.1; | ||||||||||||||||||||||||||||||||||||
Genbank Nucleotide ID | NM_001180700.1; | ||||||||||||||||||||||||||||||||||||
Protein Name | Protein SPT3 | ||||||||||||||||||||||||||||||||||||
Protein Synonyms/Alias | Positive regulator of Ty transcription; | ||||||||||||||||||||||||||||||||||||
Gene Name | SPT3 | ||||||||||||||||||||||||||||||||||||
Gene Synonyms/Alias | YDR392W;D9509.12; | ||||||||||||||||||||||||||||||||||||
Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast) | ||||||||||||||||||||||||||||||||||||
NCBI Taxa ID | 559292 | ||||||||||||||||||||||||||||||||||||
Functional Description (View all) |
Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and SLIK. SAGA is involved in RNA polymerase II-dependent transcriptional regulation of approximately 10% of yeast genes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction (SPT3, SPT8 and SPT20) and promoter selectivity, interaction with transcription activators (GCN5, ADA2, ADA3 and TRA1), and chromatin modification through histone acetylation (GCN5) and deubiquitination (UBP8). SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA via upstream activating sequences (UASs). SALSA, an altered form of SAGA, may be involved in positive transcriptional regulation. SPT3 is required for recruitment of TATA-binding protein (TBP) to SAGA-dependent promoters. During SAGA-mediated transcriptional inhibition, SPT3 and SPT8 prevent binding of TBP to the TATA box. SLIK is proposed to have partly overlapping functions with SAGA. It preferentially acetylates methylated histone H3, at least after activation at the GAL1-10 locus. SPT factors 3, 7 and 8 are required for the initiation of Ty transcription from the delta promoter. SPT3 regulates Ty1 as well as the mating factor genes. | ||||||||||||||||||||||||||||||||||||
Phosphorylation Sites |
dbPAF PTMs: 8
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Sequence (Fasta) | MMDKHKYRVE IQQMMFVSGE INDPPVETTS LIEDIVRGQV IEILLQSNKT AHLRGSRSIL 60 PEDVIFLIRH DKAKVNRLRT YLSWKDLRKN AKDQDASAGV ASGTGNPGAG GEDDLKKAGG 120 GEKDEKDGGN MMKVKKSQIK LPWELQFMFN EHPLENNDDN DDMDEDEREA NIVTLKRLKM 180 ADDRTRNMTK EEYVHWSDCR QASFTFRKNK RFKDWSGISQ LTEGKPHDDV IDILGFLTFE 240 IVCSLTETAL KIKQREQVLQ TQKDKSQQSS QDNTNFEFAS STLHRKKRLF DGPENVINPL 300 KPRHIEEAWR VLQTIDMRHR ALTNFKGGRL SSKPIIM 338 |
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Keyword | KW-0010--Activator |
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Interpro | |||||||||||||||||||||||||||||||||||||
PROSITE | |||||||||||||||||||||||||||||||||||||
Pfam | PF02269--TFIID-18kDa |
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Gene Ontology | GO:0005829--C:cytosol |