dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0004191
Uniprot Accession P04456; RL25_YEAST; D6W1U1;
Genbank Protein ID NP_014514.1;
Genbank Nucleotide ID NM_001183381.1;
Protein Name 60S ribosomal protein L25
Protein Synonyms/Alias RP16L;YL25;YP42';
Gene Name RPL25
Gene Synonyms/Alias YOL127W;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)		 This protein binds to a specific region on the 26S rRNA.
Phosphorylation Sites
 dbPAF PTMs: 7
PositionPeptidesSourceReferences ( PMIDs )
4----MAPSAKATAAKPhosphoGRID 2.0;curated19823750; 19795423; 26040289
8MAPSAKATAAKKAVVPhosphoGRID 2.0;curated19823750; 19795423; 22817900
28KKALKVRTSATFRLPcurated22817900; 19823750; 19547744
29KALKVRTSATFRLPKdbPTM 3.0;PhosphoGRID 2.0;SysPTM 2.0;curated11875433; 17287358; 18407956; 16381945; 23193290; 19366988;
31LKVRTSATFRLPKTLcurated22817900
59PHYNRLDSYKVIEQPdbPTM 3.0;PhosphoGRID 2.0;SysPTM 2.0;curated17287358; 16381945; 23193290; 21126336; 19366988; 22817900
71EQPITSETAMKKVEDcurated24961812
Sequence
(Fasta)		MAPSAKATAA KKAVVKGTNG KKALKVRTSA TFRLPKTLKL ARAPKYASKA VPHYNRLDSY 60
KVIEQPITSE TAMKKVEDGN ILVFQVSMKA NKYQIKKAVK ELYEVDVLKV NTLVRPNGTK 120
KAYVRLTADY DALDIANRIG YI 143
Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0903--Direct protein sequencing
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein
KW-0694--RNA-binding
KW-0699--rRNA-binding
KW-0832--Ubl conjugation
Interpro

IPR012677--Nucleotide-bd_a/b_plait
IPR012678--Ribosomal_L23/L15e_core_dom
IPR001014--Ribosomal_L23/L25_CS
IPR005633--Ribosomal_L23/L25_N
IPR013025--Ribosomal_L25/23
PROSITE

PS00050--RIBOSOMAL_L23
Pfam

PF00276--Ribosomal_L23
PF03939--Ribosomal_L23eN
Gene Ontology

GO:0022625--C:cytosolic large ribosomal subunit
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0019843--F:rRNA binding
GO:0003735--F:structural constituent of ribosome
GO:0002181--P:cytoplasmic translation
GO:0000027--P:ribosomal large subunit assembly