dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0003330
Uniprot Accession O94742; SEM1_YEAST; D6VSZ2;
Genbank Protein ID NP_010651.3;
Genbank Nucleotide ID NM_001184328.3;
Protein Name 26S proteasome complex subunit SEM1
Protein Synonyms/Alias
Gene Name SEM1
Gene Synonyms/Alias DSH1;YDR363W-A;
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c)(Baker's yeast)
NCBI Taxa ID 559292
Functional Description
(View all)
Versatile protein that might stabilize multiple protein complexes involved in diverse pathways. Subunit of the 26S proteasome which plays a role in ubiquitin-dependent proteolysis. Associates also with the TREX-2 complex that is required for transcription-coupled mRNA export, and the COP9 signalosome, which is involved in deneddylation.
Phosphorylation Sites
dbPAF PTMs: 2
PositionPeptidesSourceReferences ( PMIDs )
2------MSTDVAAAQPhosphoGRID 2.0;curated19823750; 19795423; 15665377
12VAAAQAQSKIDLTKKPhosphoGRID 2.0;UniProt;curated20486117; 19823750; 19795423; 15665377; 26040406; 22369663;
Sequence
(Fasta)
MSTDVAAAQA QSKIDLTKKK NEEINKKSLE EDDEFEDFPI DTWANGETIK SNAVTQTNIW 60
EENWDDVEVD DDFTNELKAE LDRYKRENQ
Keyword

KW-0002--3D-structure
KW-0007--Acetylation
KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-0647--Proteasome
KW-1185--Reference proteome
KW-0804--Transcription

Interpro

IPR007834--DSS1_SEM1

PROSITE
Pfam

PF05160--DSS1_SEM1

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0008541--C:proteasome regulatory particle, lid subcomplex
GO:0034515--C:proteasome storage granule
GO:0000724--P:double-strand break repair via homologous recombination
GO:0006887--P:exocytosis
GO:0030447--P:filamentous growth
GO:0016578--P:histone deubiquitination
GO:0035753--P:maintenance of DNA trinucleotide repeats
GO:0006406--P:mRNA export from nucleus
GO:0043248--P:proteasome assembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051726--P:regulation of cell cycle
GO:0072742--P:SAGA complex localization to transcription regulatory region
GO:0006351--P:transcription, DNA-templated
GO:0006511--P:ubiquitin-dependent protein catabolic process