dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0001608
Uniprot Accession O43679; LDB2_HUMAN; O60619; O75480;
Genbank Protein ID NP_001124306.1; NP_001281.1;
Genbank Nucleotide ID NM_001130834.2; NM_001290.4;
Protein Name LIM domain-binding protein 2
Protein Synonyms/Alias
Gene Name LDB2
Gene Synonyms/Alias CLIM1;
Organism Homo sapiens(Human)
NCBI Taxa ID 9606
Functional Description
(View all)		 Binds to the LIM domain of a wide variety of LIM domain-containing transcription factors.
Phosphorylation Sites
 dbPAF PTMs: 3
PositionPeptidesSourceReferences ( PMIDs )
203LTNFTLNYLRLCVILPhosphoSitePlus;curated22135298; 22817900
285STGSKKKTTAANLSLPhosphoSitePlus22135298
306VMVVGEPTLMGGEFGPhosphoSitePlus22135298
Sequence
(Fasta)		MSSTPHDPFY SSPFGPFYRR HTPYMVQPEY RIYEMNKRLQ SRTEDSDNLW WDAFATEFFE 60
DDATLTLSFC LEDGPKRYTI GRTLIPRYFS TVFEGGVTDL YYILKHSKES YHNSSITVDC 120
DQCTMVTQHG KPMFTKVCTE GRLILEFTFD DLMRIKTWHF TIRQYRELVP RSILAMHAQD 180
PQVLDQLSKN ITRMGLTNFT LNYLRLCVIL EPMQELMSRH KTYNLSPRDC LKTCLFQKWQ 240
RMVAPPAEPT RQPTTKRRKR KNSTSSTSNS SAGNNANSTG SKKKTTAANL SLSSQVPDVM 300
VVGEPTLMGG EFGDEDERLI TRLENTQYDA ANGMDDEEDF NNSPALGNNS PWNSKPPATQ 360
ETKSENPPPQ ASQ 374
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0832--Ubl conjugation
Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS
PROSITE
Pfam
Gene Ontology

GO:0005634--C:nucleus
GO:0005667--C:transcription factor complex
GO:0030274--F:LIM domain binding
GO:0003712--F:transcription cofactor activity
GO:0010669--P:epithelial structure maintenance
GO:0001942--P:hair follicle development
GO:0044089--P:positive regulation of cellular component biogenesis
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0035019--P:somatic stem cell population maintenance