dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0001555
Uniprot Accession O43502; RA51C_HUMAN; O43503; Q3B783;
Genbank Protein ID NP_002867.1; NP_478123.1;
Genbank Nucleotide ID NM_002876.3; NM_058216.2;
Protein Name DNA repair protein RAD51 homolog 3
Protein Synonyms/Alias
Gene Name RAD51C
Gene Synonyms/Alias RAD51L2;
Organism Homo sapiens(Human)
NCBI Taxa ID 9606
Functional Description
(View all)
Essential for the homologous recombination (HR) pathway of DNA repair. Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents. Part of the RAD21 paralog protein complexes BCDX2 and CX3 which act at different stages of the BRCA1-BRCA2-dependent HR pathway. Upon DNA damage, BCDX2 seems to act downstream of BRCA2 recruitment and upstream of RAD51 recruitment; CX3 seems to act downstream of RAD51 recruitment; both complexes bind predominantly to the intersection of the four duplex arms of the Holliday junction (HJ) and to junction of replication forks. The BCDX2 complex was originally reported to bind single-stranded DNA, single-stranded gaps in duplex DNA and specifically to nicks in duplex DNA. The BCDX2 subcomplex RAD51B:RAD51C exhibits single-stranded DNA-dependent ATPase activity suggesting an involvement in early stages of the HR pathway. Involved in RAD51 foci formation in response to DNA damage suggesting an involvement in early stages of HR probably in the invasion step. Has an early function in DNA repair in facilitating phosphorylation of the checkpoint kinase CHEK2 and thereby transduction of the damage signal, leading to cell cycle arrest and HR activation. Participates in branch migration and HJ resolution and thus is important for processing HR intermediates late in the DNA repair process; the function may be linked to the CX3 complex. Part of a PALB2-scaffolded HR complex containing BRCA2 and which is thought to play a role in DNA repair by HR. Protects RAD51 from ubiquitin-mediated degradation that is enhanced following DNA damage. Plays a role in regulating mitochondrial DNA copy number under conditions of oxidative stress in the presence of RAD51 and XRCC3. Contributes to DNA cross-link resistance, sister chromatid cohesion and genomic stability. Involved in maintaining centrosome number in mitosis.
Phosphorylation Sites
dbPAF PTMs: 1
PositionPeptidesSourceReferences ( PMIDs )
20DLVSFPLSPAVRVKLdbPTM 3.0;PhosphoSitePlus;curated21659604; 16381945; 23193290; 22135298; 25850435; 25627689;
Sequence
(Fasta)
MRGKTFRFEM QRDLVSFPLS PAVRVKLVSA GFQTAEELLE VKPSELSKEV GISKAEALET 60
LQIIRRECLT NKPRYAGTSE SHKKCTALEL LEQEHTQGFI ITFCSALDDI LGGGVPLMKT 120
TEICGAPGVG KTQLCMQLAV DVQIPECFGG VAGEAVFIDT EGSFMVDRVV DLATACIQHL 180
QLIAEKHKGE EHRKALEDFT LDNILSHIYY FRCRDYTELL AQVYLLPDFL SEHSKVRLVI 240
VDGIAFPFRH DLDDLSLRTR LLNGLAQQMI SLANNHRLAV ILTNQMTTKI DRNQALLVPA 300
LGESWGHAAT IRLIFHWDRK QRLATLYKSP SQKECTVLFQ IKPQGFRDTV VTSACSLQTE 360
GSLSTRKRSR DPEEEL 377
Keyword

KW-0025--Alternative splicing
KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0225--Disease mutation
KW-0227--DNA damage
KW-0233--DNA recombination
KW-0234--DNA repair
KW-0238--DNA-binding
KW-0923--Fanconi anemia
KW-0496--Mitochondrion
KW-0547--Nucleotide-binding
KW-0539--Nucleus
KW-0621--Polymorphism
KW-1185--Reference proteome

Interpro

IPR003593--AAA+_ATPase
IPR013632--DNA_recomb/repair_Rad51_C
IPR016467--DNA_recomb/repair_RecA-like
IPR027417--P-loop_NTPase
IPR020588--RecA_ATP-bd

PROSITE

PS50162--RECA_2

Pfam

PF08423--Rad51

Gene Ontology

GO:0000794--C:condensed nuclear chromosome
GO:0005737--C:cytoplasm
GO:0005739--C:mitochondrion
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0048471--C:perinuclear region of cytoplasm
GO:0033063--C:Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0033065--C:Rad51C-XRCC3 complex
GO:0005657--C:replication fork
GO:0005524--F:ATP binding
GO:0008821--F:crossover junction endodeoxyribonuclease activity
GO:0003677--F:DNA binding
GO:0008094--F:DNA-dependent ATPase activity
GO:0003690--F:double-stranded DNA binding
GO:0000150--F:recombinase activity
GO:0003697--F:single-stranded DNA binding
GO:0007596--P:blood coagulation
GO:0070192--P:chromosome organization involved in meiosis
GO:0000730--P:DNA recombinase assembly
GO:0006310--P:DNA recombination
GO:0006281--P:DNA repair
GO:0006302--P:double-strand break repair
GO:0000724--P:double-strand break repair via homologous recombination
GO:0045003--P:double-strand break repair via synthesis-dependent strand annealing
GO:0007066--P:female meiosis sister chromatid cohesion
GO:0007141--P:male meiosis I
GO:0006312--P:mitotic recombination
GO:0010971--P:positive regulation of G2/M transition of mitotic cell cycle
GO:0007131--P:reciprocal meiotic recombination
GO:0010212--P:response to ionizing radiation
GO:0007062--P:sister chromatid cohesion
GO:0007283--P:spermatogenesis
GO:0042148--P:strand invasion