dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0001455
Uniprot Accession O43151; TET3_HUMAN; A6NEI3; Q86Z24; Q8TBM9;
Genbank Protein ID
Genbank Nucleotide ID
Protein Name Methylcytosine dioxygenase TET3
Protein Synonyms/Alias
Gene Name TET3
Gene Synonyms/Alias KIAA0401;
Organism Homo sapiens(Human)
NCBI Taxa ID 9606
Functional Description
(View all)
Dioxygenase that catalyzes the conversion of the modified genomic base 5-methylcytosine (5mC) into 5-hydroxymethylcytosine (5hmC) and plays a key role in epigenetic chromatin reprogramming in the zygote following fertilization. Also mediates subsequent conversion of 5hmC into 5-formylcytosine (5fC), and conversion of 5fC to 5-carboxylcytosine (5caC). Conversion of 5mC into 5hmC, 5fC and 5caC probably constitutes the first step in cytosine demethylation. In zygotes, DNA demethylation occurs selectively in the paternal pronucleus before the first cell division, while the adjacent maternal pronucleus and certain paternally-imprinted loci are protected from this process. Participates in DNA demethylation in the paternal pronucleus by mediating conversion of 5mC into 5hmC, 5fC and 5caC. Does not mediate DNA demethylation of maternal pronucleus because of the presence of DPPA3/PGC7 on maternal chromatin that prevents TET3-binding to chromatin (By similarity). In addition to its role in DNA demethylation, also involved in the recruitment of the O-GlcNAc transferase OGT to CpG-rich transcription start sites of active genes, thereby promoting histone H2B GlcNAcylation by OGT.
Phosphorylation Sites
dbPAF PTMs: 28 (View all)
PositionPeptidesSourceReferences ( PMIDs )
3-----MDSGPVYHGDPhosphoSitePlus22135298
7-MDSGPVYHGDSRQLPhosphoSitePlus22135298
78VAEAVSSYGALSTRLPhosphoSitePlus22135298
83SSYGALSTRLYETFNPhosphoSitePlus22135298
306PEAWGTDTPPATPRSPhosphoSitePlus22135298
310GTDTPPATPRSSWPMPhosphoSitePlus22135298
363KVEAPSSSPAPAPSPcurated25850435; 25627689
369SSPAPAPSPVLQREAPhosphoSitePlus;curated22135298; 25850435; 25627689
545RDSLLPPTQEMRSPSPhosphoSitePlus22135298
555MRSPSPMTALQPGSTPhosphoSitePlus22135298
612TCLPAPESPFATRSPPhosphoSitePlus22135298
657TKAENPLTPTLSGFLPhosphoSitePlus;curated22135298; 25850435; 25627689; 26074081
666TLSGFLESPLKYLDTPhosphoSitePlus;curated22135298; 25850435; 25627689; 26074081
673SPLKYLDTPTKSLLDPhosphoSitePlus22135298
677YLDTPTKSLLDTPAKPhosphoSitePlus22135298
681PTKSLLDTPAKRAQAPhosphoSitePlus;curated22135298; 23186163
1048IQKEKLSTPEKIKQEPhosphoSitePlus22135298
1242PKAPLLHSVSRDPSPcurated23898821
1244APLLHSVSRDPSPFAcurated23898821
1248HSVSRDPSPFAQSSNPhosphoSitePlus;curated22135298; 23898821
Sequence
(Fasta)
MDSGPVYHGD SRQLSASGVP VNGAREPAGP SLLGTGGPWR VDQKPDWEAA PGPAHTARLE 60
DAHDLVAFSA VAEAVSSYGA LSTRLYETFN REMSREAGNN SRGPRPGPEG CSAGSEDLDT 120
LQTALALARH GMKPPNCNCD GPECPDYLEW LEGKIKSVVM EGGEERPRLP GPLPPGEAGL 180
PAPSTRPLLS SEVPQISPQE GLPLSQSALS IAKEKNISLQ TAIAIEALTQ LSSALPQPSH 240
STPQASCPLP EALSPPAPFR SPQSYLRAPS WPVVPPEEHS SFAPDSSAFP PATPRTEFPE 300
AWGTDTPPAT PRSSWPMPRP SPDPMAELEQ LLGSASDYIQ SVFKRPEALP TKPKVKVEAP 360
SSSPAPAPSP VLQREAPTPS SEPDTHQKAQ TALQQHLHHK RSLFLEQVHD TSFPAPSEPS 420
APGWWPPPSS PVPRLPDRPP KEKKKKLPTP AGGPVGTEKA APGIKPSVRK PIQIKKSRPR 480
EAQPLFPPVR QIVLEGLRSP ASQEVQAHPP APLPASQGSA VPLPPEPSLA LFAPSPSRDS 540
LLPPTQEMRS PSPMTALQPG STGPLPPADD KLEELIRQFE AEFGDSFGLP GPPSVPIQDP 600
ENQQTCLPAP ESPFATRSPK QIKIESSGAV TVLSTTCFHS EEGGQEATPT KAENPLTPTL 660
SGFLESPLKY LDTPTKSLLD TPAKRAQAEF PTCDCVEQIV EKDEGPYYTH LGSGPTVASI 720
RELMEERYGE KGKAIRIEKV IYTGKEGKSS RGCPIAKWVI RRHTLEEKLL CLVRHRAGHH 780
CQNAVIVILI LAWEGIPRSL GDTLYQELTD TLRKYGNPTS RRCGLNDDRT CACQGKDPNT 840
CGASFSFGCS WSMYFNGCKY ARSKTPRKFR LAGDNPKEEE VLRKSFQDLA TEVAPLYKRL 900
APQAYQNQVT NEEIAIDCRL GLKEGRPFAG VTACMDFCAH AHKDQHNLYN GCTVVCTLTK 960
EDNRCVGKIP EDEQLHVLPL YKMANTDEFG SEENQNAKVG SGAIQVLTAF PREVRRLPEP 1020
AKSCRQRQLE ARKAAAEKKK IQKEKLSTPE KIKQEALELA GITSDPGLSL KGGLSQQGLK 1080
PSLKVEPQNH FSSFKYSGNA VVESYSVLGN CRPSDPYSMN SVYSYHSYYA QPSLTSVNGF 1140
HSKYALPSFS YYGFPSSNPV FPSQFLGPGA WGHSGSSGSF EKKPDLHALH NSLSPAYGGA 1200
EFAELPSQAV PTDAHHPTPH HQQPAYPGPK EYLLPKAPLL HSVSRDPSPF AQSSNCYNRS 1260
IKQEPVDPLT QAEPVPRDAG KMGKTPLSEV SQNGGPSHLW GQYSGGPSMS PKRTNGVGGS 1320
WGVFSSGESP AIVPDKLSSF GASCLAPSHF TDGQWGLFPG EGQQAASHSG GRLRGKPWSP 1380
CKFGNSTSAL AGPSLTEKPW ALGAGDFNSA LKGSPGFQDK LWNPMKGEEG RIPAAGASQL 1440
DRAWQSFGLP LGSSEKLFGA LKSEEKLWDP FSLEEGPAEE PPSKGAVKEE KGGGGAEEEE 1500
EELWSDSEHN FLDENIGGVA VAPAHGSILI ECARRELHAT TPLKKPNRCH PTRISLVFYQ 1560
HKNLNQPNHG LALWEAKMKQ LAERARARQE EAARLGLGQQ EAKLYGKKRK WGGTVVAEPQ 1620
QKEKKGVVPT RQALAVPTDS AVTVSSYAYT KVTGPYSRWI 1661
Keyword

KW-0025--Alternative splicing
KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0217--Developmental protein
KW-0223--Dioxygenase
KW-0238--DNA-binding
KW-0408--Iron
KW-1017--Isopeptide bond
KW-0479--Metal-binding
KW-0539--Nucleus
KW-0560--Oxidoreductase
KW-0621--Polymorphism
KW-1185--Reference proteome
KW-0832--Ubl conjugation
KW-0862--Zinc

Interpro

IPR024779--2OGFeDO_nucleic_acid_mod

PROSITE
Pfam

PF12851--Tet_JBP

Gene Ontology

GO:0005737--C:cytoplasm
GO:0001939--C:female pronucleus
GO:0001940--C:male pronucleus
GO:0003677--F:DNA binding
GO:0046872--F:metal ion binding
GO:0070579--F:methylcytosine dioxygenase activity
GO:0080111--P:DNA demethylation
GO:0044727--P:DNA demethylation of male pronucleus
GO:0010467--P:gene expression
GO:0080182--P:histone H3-K4 trimethylation
GO:0035511--P:oxidative DNA demethylation
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0006493--P:protein O-linked glycosylation
GO:0040029--P:regulation of gene expression, epigenetic