dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0001236
Uniprot Accession O35485; VEGFB_RAT; O54881; Q6DGF3;
Genbank Protein ID NP_446001.1; XP_006230972.1; XP_006230973.1;
Genbank Nucleotide ID NM_053549.1; XM_006230910.2; XM_006230911.2;
Protein Name Vascular endothelial growth factor B
Protein Synonyms/Alias
Gene Name Vegfb
Gene Synonyms/Alias Vrf;
Organism Rattus norvegicus(Rat)
NCBI Taxa ID 10116
Functional Description
(View all)
Growth factor for endothelial cells. VEGF-B167 binds heparin and neuropilin-1 whereas the binding to neuropilin-1 of VEGF-B186 is regulated by proteolysis (By similarity).
Phosphorylation Sites
dbPAF PTMs: 1
PositionPeptidesSourceReferences ( PMIDs )
24ACTQAPVSQFDGPSHPhosphoSitePlus22135298
Sequence
(Fasta)
MSPLLRRLLL VALLQLACTQ APVSQFDGPS HQKKVVSWID VYARATCQPR EVVVPLSMEL 60
MGNVVKQLVP SCVTVQRCGG CCPDDGLECV PIGQHQVRMQ ILMIQYPSSQ LGEMSLEEHS 120
QCECRPKRKE SAVKPDRVAI PHHRPQPRSV LSWDSAPGAS SPADIIHPTP APGPSAHAAP 180
SAVSALIPGP AVAAADAAAS SIAKGGA 208
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-1015--Disulfide bond
KW-0339--Growth factor
KW-0358--Heparin-binding
KW-0497--Mitogen
KW-1185--Reference proteome
KW-0964--Secreted
KW-0732--Signal

Interpro

IPR029034--Cystine-knot_cytokine
IPR023581--PD_growth_factor_CS
IPR000072--PDGF/VEGF_dom

PROSITE

PS00249--PDGF_1
PS50278--PDGF_2

Pfam

PF00341--PDGF

Gene Ontology

GO:0005615--C:extracellular space
GO:0005622--C:intracellular
GO:0016020--C:membrane
GO:0042056--F:chemoattractant activity
GO:0008201--F:heparin binding
GO:0001525--P:angiogenesis
GO:0060048--P:cardiac muscle contraction
GO:0060976--P:coronary vasculature development
GO:0050930--P:induction of positive chemotaxis
GO:0010629--P:negative regulation of gene expression
GO:0043524--P:negative regulation of neuron apoptotic process
GO:0051781--P:positive regulation of cell division
GO:0001938--P:positive regulation of endothelial cell proliferation
GO:0070374--P:positive regulation of ERK1 and ERK2 cascade
GO:0060754--P:positive regulation of mast cell chemotaxis
GO:0050731--P:positive regulation of peptidyl-tyrosine phosphorylation
GO:0051897--P:positive regulation of protein kinase B signaling
GO:0030949--P:positive regulation of vascular endothelial growth factor receptor signaling pathway
GO:0035470--P:positive regulation of vascular wound healing
GO:0006493--P:protein O-linked glycosylation
GO:0042493--P:response to drug