dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0000890
Uniprot Accession O15205; UBD_HUMAN; B0UZT6; Q5STL2; Q5SUK2; Q96EC7;
Genbank Protein ID NP_006389.2;
Genbank Nucleotide ID NM_006398.3;
Protein Name Ubiquitin D
Protein Synonyms/Alias Diubiquitin;Ubiquitin-like protein FAT10;
Gene Name UBD
Gene Synonyms/Alias FAT10;
Organism Homo sapiens(Human)
NCBI Taxa ID 9606
Functional Description
(View all)
Ubiquitin-like protein modifier which can be covalently attached to target protein and subsequently leads to their degradation by the 26S proteasome, in a NUB1L-dependent manner. Probably functions as a survival factor. Conjugation ability activated by UBA6. Promotes the expression of the proteasome subunit beta type-9 (PSMB9/LMP2). Regulates TNF-alpha-induced and LPS-mediated activation of the central mediator of innate immunity NF-kappa-B by promoting TNF-alpha-mediated proteasomal degradation of ubiquitinated-I-kappa-B-alpha. Required for TNF-alpha-induced p65 nuclear translocation in renal tubular epithelial cells (RTECs). May be involved in dendritic cell (DC) maturation, the process by which immature dendritic cells differentiate into fully competent antigen-presenting cells that initiate T-cell responses. Mediates mitotic non-disjunction and chromosome instability, in long-term in vitro culture and cancers, by abbreviating mitotic phase and impairing the kinetochore localization of MAD2L1 during the prometaphase stage of the cell cycle. May be involved in the formation of aggresomes when proteasome is saturated or impaired. Mediates apoptosis in a caspase-dependent manner, especially in renal epithelium and tubular cells during renal diseases such as polycystic kidney disease and Human immunodeficiency virus (HIV)-associated nephropathy (HIVAN).
Phosphorylation Sites
dbPAF PTMs: 8
PositionPeptidesSourceReferences ( PMIDs )
64LKPRRSLSSYGIDKEcurated26074081
73YGIDKEKTIHLTLKVPhosphoSitePlus22135298
77KEKTIHLTLKVVKPSPhosphoSitePlus;curated22135298; 26074081
109HLLQVRRSSSVAQVKdbPTM 3.0;PhosphoSitePlus;curated18187866; 16381945; 23193290; 22135298; 22817900
110LLQVRRSSSVAQVKAdbPTM 3.0;PhosphoSitePlus;curated18187866; 16381945; 23193290; 22135298; 22817900
111LQVRRSSSVAQVKAMdbPTM 3.0;PhosphoSitePlus;curated18187866; 16381945; 23193290; 22135298; 22817900; 24702127
148DGKMMADYGIRKGNLPhosphoSitePlus22135298
161NLLFLACYCIGG---PhosphoSitePlus22135298
Sequence
(Fasta)
MAPNASCLCV HVRSEEWDLM TFDANPYDSV KKIKEHVRSK TKVPVQDQVL LLGSKILKPR 60
RSLSSYGIDK EKTIHLTLKV VKPSDEELPL FLVESGDEAK RHLLQVRRSS SVAQVKAMIE 120
TKTGIIPETQ IVTCNGKRLE DGKMMADYGI RKGNLLFLAC YCIGG 166
Keyword

KW-0002--3D-structure
KW-0007--Acetylation
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-0621--Polymorphism
KW-1185--Reference proteome
KW-0677--Repeat
KW-0833--Ubl conjugation pathway

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

Gene Ontology

GO:0016235--C:aggresome
GO:0005737--C:cytoplasm
GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0070628--F:proteasome binding
GO:0070842--P:aggresome assembly
GO:0043011--P:myeloid dendritic cell differentiation
GO:0043065--P:positive regulation of apoptotic process
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0032446--P:protein modification by small protein conjugation
GO:0016567--P:protein ubiquitination
GO:0006508--P:proteolysis
GO:0034341--P:response to interferon-gamma
GO:0034612--P:response to tumor necrosis factor
GO:0006511--P:ubiquitin-dependent protein catabolic process