dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0000834
Uniprot Accession O15047; SET1A_HUMAN; A6NP62; Q6PIF3; Q8TAJ6;
Genbank Protein ID NP_055527.1; XP_005255780.1; XP_006721169.1; XP_011544296.1; XP_011544297.1; XP_011544298.1;
Genbank Nucleotide ID NM_014712.2; XM_005255723.1; XM_006721106.2; XM_011545994.1; XM_011545995.1; XM_011545996.1;
Protein Name Histone-lysine N-methyltransferase SETD1A
Protein Synonyms/Alias Lysine N-methyltransferase 2F;SET domain-containing protein 1A;hSET1A;Set1/Ash2 histone methyltransferase complex subunit SET1;
Gene Name SETD1A
Gene Synonyms/Alias KIAA0339;KMT2F;SET1;SET1A;
Organism Homo sapiens(Human)
NCBI Taxa ID 9606
Functional Description
(View all)
Histone methyltransferase that specifically methylates 'Lys-4' of histone H3, when part of the SET1 histone methyltransferase (HMT) complex, but not if the neighboring 'Lys-9' residue is already methylated. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. The non-overalpping localization with SETD1B suggests that SETD1A and SETD1B make non-redundant contributions to the epigenetic control of chromatin structure and gene expression.
Phosphorylation Sites
dbPAF PTMs: 98 (View all)
PositionPeptidesSourceReferences ( PMIDs )
97QIPLKEVTFARLNDNPhosphoSitePlus22135298
179KGQQRMKYYELIVNGPhosphoSitePlus;curated22135298; 22817900
180GQQRMKYYELIVNGSPhosphoSitePlus;curated22135298; 22817900
188ELIVNGSYTPQTVPTPhosphoSitePlus;curated22135298; 22817900
207LSEKFQGSGAATETAPhosphoSitePlus22135298
220TAESRRRSSSDTAAYPhosphoSitePlus;curated22135298; 23898821
221AESRRRSSSDTAAYPPhosphoSitePlus22135298
222ESRRRSSSDTAAYPAPhosphoSitePlus22135298
224RRRSSSDTAAYPAGTPhosphoSitePlus22135298
268GQFTPQSSQGTPYTSPhosphoSitePlus22135298
271TPQSSQGTPYTSRGSPhosphoSitePlus22135298
273QSSQGTPYTSRGSTPPhosphoSitePlus22135298
274SSQGTPYTSRGSTPYPhosphoSitePlus22135298
293AYSSSTTSTSFKPRRPhosphoSitePlus22135298
315AFSRRHFSASSASTTPhosphoSitePlus22135298
330ASTAIAATTAATASSPhosphoSitePlus22135298
343SSSASSSSLSSSSSSPhosphoSitePlus22135298
347SSSSLSSSSSSSSSSPhosphoSitePlus22135298
348SSSLSSSSSSSSSSSPhosphoSitePlus22135298
349SSLSSSSSSSSSSSSPhosphoSitePlus22135298
Sequence
(Fasta)
MDQEGGGDGQ KAPSFQWRNY KLIVDPALDP ALRRPSQKVY RYDGVHFSVN DSKYIPVEDL 60
QDPRCHVRSK NRDFSLPVPK FKLDEFYIGQ IPLKEVTFAR LNDNVRETFL KDMCRKYGEV 120
EEVEILLHPR TRKHLGLARV LFTSTRGAKE TVKNLHLTSV MGNIIHAQLD IKGQQRMKYY 180
ELIVNGSYTP QTVPTGGKAL SEKFQGSGAA TETAESRRRS SSDTAAYPAG TTAVGTPGNG 240
TPCSQDTSFS SSRQDTPSSF GQFTPQSSQG TPYTSRGSTP YSQDSAYSSS TTSTSFKPRR 300
SENSYQDAFS RRHFSASSAS TTASTAIAAT TAATASSSAS SSSLSSSSSS SSSSSSSQFR 360
SSDANYPAYY ESWNRYQRHT SYPPRRATRE EPPGAPFAEN TAERFPPSYT SYLPPEPSRP 420
TDQDYRPPAS EAPPPEPPEP GGGGGGGGPS PEREEVRTSP RPASPARSGS PAPETTNESV 480
PFAQHSSLDS RIEMLLKEQR SKFSFLASDT EEEEENSSMV LGARDTGSEV PSGSGHGPCT 540
PPPAPANFED VAPTGSGEPG ATRESPKANG QNQASPCSSG DDMEISDDDR GGSPPPAPTP 600
PQQPPPPPPP PPPPPPYLAS LPLGYPPHQP AYLLPPRPDG PPPPEYPPPP PPPPHIYDFV 660
NSLELMDRLG AQWGGMPMSF QMQTQMLTRL HQLRQGKGLI AASAGPPGGA FGEAFLPFPP 720
PQEAAYGLPY ALYAQGQEGR GAYSREAYHL PMPMAAEPLP SSSVSGEEAR LPPREEAELA 780
EGKTLPTAGT VGRVLAMLVQ EMKSIMQRDL NRKMVENVAF GAFDQWWESK EEKAKPFQNA 840
AKQQAKEEDK EKTKLKEPGL LSLVDWAKSG GTTGIEAFAF GSGLRGALRL PSFKVKRKEP 900
SEISEASEEK RPRPSTPAEE DEDDPEQEKE AGEPGRPGTK PPKRDEERGK TQGKHRKSFA 960
LDSEGEEASQ ESSSEKDEED DEEDEEDEDR EEAVDTTKKE TEVSDGEDEE SDSSSKCSLY 1020
ADSDGENDST SDSESSSSSS SSSSSSSSSS SSSSSSSSES SSEDEEEEER PAALPSASPP 1080
PREVPVPTPA PVEVPVPERV AGSPVTPLPE QEASPARPAG PTEESPPSAP LRPPEPPAGP 1140
PAPAPRPDER PSSPIPLLPP PKKRRKTVSF SAIEVVPAPE PPPATPPQAK FPGPASRKAP 1200
RGVERTIRNL PLDHASLVKS WPEEVSRGGR SRAGGRGRLT EEEEAEPGTE VDLAVLADLA 1260
LTPARRGLPA LPAVEDSEAT ETSDEAERPR PLLSHILLEH NYALAVKPTP PAPALRPPEP 1320
VPAPAALFSS PADEVLEAPE VVVAEAEEPK PQQLQQQREE GEEEGEEEGE EEEEESSDSS 1380
SSSDGEGALR RRSLRSHARR RRPPPPPPPP PPRAYEPRSE FEQMTILYDI WNSGLDSEDM 1440
SYLRLTYERL LQQTSGADWL NDTHWVHHTI TNLTTPKRKR RPQDGPREHQ TGSARSEGYY 1500
PISKKEKDKY LDVCPVSARQ LEGVDTQGTN RVLSERRSEQ RRLLSAIGTS AIMDSDLLKL 1560
NQLKFRKKKL RFGRSRIHEW GLFAMEPIAA DEMVIEYVGQ NIRQMVADMR EKRYVQEGIG 1620
SSYLFRVDHD TIIDATKCGN LARFINHCCT PNCYAKVITI ESQKKIVIYS KQPIGVDEEI 1680
TYDYKFPLED NKIPCLCGTE SCRGSLN 1708
Keyword

KW-0002--3D-structure
KW-0010--Activator
KW-0156--Chromatin regulator
KW-0158--Chromosome
KW-0181--Complete proteome
KW-0489--Methyltransferase
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-0621--Polymorphism
KW-1185--Reference proteome
KW-0694--RNA-binding
KW-0949--S-adenosyl-L-methionine
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0808--Transferase

Interpro

IPR024657--COMPASS_Set1_N-SET
IPR012677--Nucleotide-bd_a/b_plait
IPR003616--Post-SET_dom
IPR000504--RRM_dom
IPR001214--SET_dom

PROSITE

PS50868--POST_SET
PS50102--RRM
PS50280--SET

Pfam

PF11764--N-SET
PF00076--RRM_1
PF00856--SET

Gene Ontology

GO:0035097--C:histone methyltransferase complex
GO:0005719--C:nuclear euchromatin
GO:0016607--C:nuclear speck
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0048188--C:Set1C/COMPASS complex
GO:0008013--F:beta-catenin binding
GO:1990188--F:euchromatin binding
GO:0042800--F:histone methyltransferase activity (H3-K4 specific)
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0006325--P:chromatin organization
GO:0051568--P:histone H3-K4 methylation
GO:2000179--P:positive regulation of neural precursor cell proliferation
GO:2000648--P:positive regulation of stem cell proliferation
GO:0006355--P:regulation of transcription, DNA-templated
GO:0019827--P:stem cell population maintenance
GO:0006351--P:transcription, DNA-templated