dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0000608
Uniprot Accession O14233; RNA14_SCHPO;
Genbank Protein ID NP_593303.1;
Genbank Nucleotide ID NM_001018733.2;
Protein Name mRNA 3'-end-processing protein rna14
Protein Synonyms/Alias
Gene Name rna14
Gene Synonyms/Alias SPAC6F12.17;
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast)
NCBI Taxa ID 284812
Functional Description
(View all)
Component of the cleavage factor IA (CFIA) complex, which is involved in the endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation.
Phosphorylation Sites
dbPAF PTMs: 2
PositionPeptidesSourceReferences ( PMIDs )
13NVEADASSNIIKDSPcurated22817900
19SSNIIKDSPKIKEQEcurated22817900
Sequence
(Fasta)
MNSDDNVEAD ASSNIIKDSP KIKEQENTST VNESDVLATS TTASSGVKRK RLPNDLVGQL 60
RDKIQENPND ISSWYALVEE YGSKGKHEEL RETYEQMLRP FPYVPRVWVD YISSELAFND 120
FHAVELLFSR CLVKVLSVDL WTLYLSYIRR INPDGEGQSR STITQAYEFV INTIGVDILS 180
GPIWSEFVDF LRSGPANSTW EQQQKLDHVR RIYQRAITTP IHNIEKLWRD YDAFENSVNR 240
ATARKFVAEK SPVYMAARAA MRELSNLTEG LRVYDFTFER KYTKVERIAY SRWMNWIKWE 300
QSDPLDLQHG TMLQNRIAYA FEQAMLYVPL CPQIWLDGFS YFLSISDEQR ALQTIRRGMR 360
YCPSNFVLHV RYAEHEEANN RTSEIRSTYE SLIAALAREI SQLDSKASSS SESSTDGNPQ 420
EKKLPEHLVK RKSRLVRQYS LAWCCLINAI RRTEGVKAAR AIFTKARKAP YQSHEIYIAS 480
AMMEHHCSRD PVIASRIFEL GMRHFGDVPA YVYKYLSYLI AINDETNARA LFEKAIPRIA 540
ADEAKPIYQK WLDYESNYGD LNAAIALSQR MAVVYPQEST QAIFLSRYGL KDDAEEEERE 600
TKEAEKIREL SVRLNGGNGF PGHVHNNRED DEVSIASTSS KSNVEMEDTR LLPASLELAN 660
TQGASNPPTS ALPTVPVPLP SIITEFLDEL PAPQVITGPR IQPTKLIDHI IKSDIPFIRL 720
RNANAHLKRA RFN 734
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0507--mRNA processing
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat

Interpro

IPR003107--HAT
IPR008847--Suf
IPR011990--TPR-like_helical_dom

PROSITE
Pfam

PF05843--Suf

Gene Ontology

GO:0005739--C:mitochondrion
GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0005849--C:mRNA cleavage factor complex
GO:0005634--C:nucleus
GO:0003729--F:mRNA binding
GO:0006379--P:mRNA cleavage
GO:0006378--P:mRNA polyadenylation
GO:0031123--P:RNA 3'-end processing