dbPAF Protein Information
| Tag | Content | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| dbPAF ID | dbPAF-0000590 | ||||||||||||
| Uniprot Accession | O14176; PRP40_SCHPO; | ||||||||||||
| Genbank Protein ID | NP_594966.1; | ||||||||||||
| Genbank Nucleotide ID | NM_001020397.2; | ||||||||||||
| Protein Name | Pre-mRNA-processing protein prp40 | ||||||||||||
| Protein Synonyms/Alias | |||||||||||||
| Gene Name | prp40 | ||||||||||||
| Gene Synonyms/Alias | SPAC4D7.13; | ||||||||||||
| Organism | Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast) | ||||||||||||
| NCBI Taxa ID | 284812 | ||||||||||||
| Functional Description (View all) |
Required for pre-spliceosome formation, which is the first step of pre-mRNA splicing. This protein is associated with snRNP U1 (By similarity). | ||||||||||||
| Phosphorylation Sites |
dbPAF PTMs: 2
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| Sequence (Fasta) | MSAPPWQTSE YDETEGFTSN QEGPSAAPSK TVASDWHEVK TEDSRVYYYN SVTRKSVWEK 60 PEELMNDFEK KLSKLAWKEY ATADGKKYWY NVNTRESVWD IPDEYKAALV DEPEQQKKAL 120 SSKIKSNDNK PAVQSIQRHG PDVAAPSSQP AKDQSQQISQ GSHKRTINFV QQKDKRQKRS 180 NDYQHENYDT YEAAERAFFK FLDSHNVNPS WTWEQTVREL CDAKGYYVMK DPWHRKCAFD 240 AYILNYLTDQ SDAEKNRVTK IRKEFIEMLK SSDKIHSYTL WRTVKNEFSS HPAFNATSSE 300 TEQQQLFFEY KQKLLEDEKQ LEKDRRKEAL DDFCSLLRNM NFEPYTRWSV AQAKFDQDPR 360 YTRNSNMKYL SKLDALVAFE DHVKHLEREY ILDKQKQKKE KHRIERKNRD AFRALLQDLR 420 VQKKITLRTK WKELYPIIKD DPRYLNLLGQ SGSTPLDLFW DTIVDLENMY REKRNLVLDC 480 LEVLQISVDD TSNIPEIIAR LSEKLKDREE SEAVTEDLIE EVVNRLRDKA IHKKAEEKRA 540 DERRIRRKID NLRSAIKYLK PPISADASYD EIRPLISILP EFAALHSEEH RMAAFDKYIR 600 RLREKRELEK QYQNRRGYYD VGKDESYLAN SARPHSGYED GRLEYSADLA SKSNRNEINT 660 MQDVQENSIS HVTATQPAVK NIVDDAESSE EGEIR 696 |
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| Keyword | KW-0181--Complete proteome |
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| Interpro | |||||||||||||
| PROSITE | |||||||||||||
| Pfam | |||||||||||||
| Gene Ontology | GO:0000243--C:commitment complex |