dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0000583
Uniprot Accession O14139; HRP3_SCHPO;
Genbank Protein ID NP_594967.1;
Genbank Nucleotide ID NM_001020398.2;
Protein Name Chromodomain helicase hrp3
Protein Synonyms/Alias ATP-dependent helicase hrp3;
Gene Name hrp3
Gene Synonyms/Alias SPAC3G6.01;
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast)
NCBI Taxa ID 284812
Functional Description
(View all)
Involved in heterochromatin silencing. Required for transcriptional repression at the silence loci of mat3, where it has a direct role as a chromatin remodeling factor.
Phosphorylation Sites
dbPAF PTMs: 3
PositionPeptidesSourceReferences ( PMIDs )
77NPGRYVDTDDQEDVFdbPTM 3.0;SysPTM 2.0;curated18257517; 16381945; 23193290; 19366988; 22817900
1250ESATRTPSPAISESRdbPTM 3.0;UniProt18257517; 16381945; 23193290
1285QTASPVKSEKDDGNVdbPTM 3.0;UniProt18257517; 16381945; 23193290
Sequence
(Fasta)
MSTSAIALAL SSSKAIEQLD HVQTETPNLK QEMSESPSNS GVASKRKLQS TEWLDPELYG 60
LRRSGRTRSN PGRYVDTDDQ EDVFPSKHRK GTRNGSSFSR HRTIRDLDDE AESVTSEESE 120
SDDSSYGGTP KKRSRQKKSN TYVQDEIRFS SRNSKGVNYN EDAYFESFEE EEEEEMYEYA 180
TEVSEEPEDT RAIDVVLDHR LIEGHDGSTP SEDYEFLIKW VNFSHLHCTW EPYNNISMIR 240
GSKKVDNHIK QVILLDREIR EDPTTTREDI EAMDIEKERK RENYEEYKQV DRIVAKHLNS 300
DGSVEYLVKW KQLLYDFCTW EASSIIEPIA ATEIQAFQER EESALSPSRG TNYGNSRPKY 360
RKLEQQPSYI TGGELRDFQL TGVNWMAYLW HKNENGILAD EMGLGKTVQT VAFLSYLAHS 420
LRQHGPFLVV VPLSTVPAWQ ETLALWASDM NCISYLGNTT SRQVIRDYEF YVDGTQKIKF 480
NLLLTTYEYV LKDRSVLSNI KWQYMAIDEA HRLKNSESSL YEALSQFKNS NRLLITGTPL 540
QNNIRELAAL VDFLMPGKFE IREEINLEAP DEEQEAYIRS LQEHLQPYIL RRLKKDVEKS 600
LPSKSERILR VELSDLQMYW YKNILTRNYR VLTQSISSGS QISLLNIVVE LKKASNHPYL 660
FDGVEESWMQ KINSQGRRDE VLKGLIMNSG KMVLLDKLLS RLRRDGHRVL IFSQMVRMLD 720
ILGDYLSLRG YPHQRLDGTV PAAVRRTSID HFNAPNSPDF VFLLSTRAGG LGINLMTADT 780
VIIFDSDWNP QADLQAMARA HRIGQKNHVM VYRLLSKDTI EEDVLERARR KMILEYAIIS 840
LGVTDKQKNS KNDKFSAEEL SAILKFGASN MFKAENNQKK LEDMNLDEIL EHAEDHDTSN 900
DVGGASMGGE EFLKQFEVTD YKADVSWDDI IPLTEREKFE EEDRLREEEE ALKQEIELSS 960
RRGNRPYPSS AVESPSYSGT SERKSKKQML KDEVLLEKEI RLLYRAMIRY GSLEHRYNDI 1020
VKYADLTTQD AHVIKKIAAD LVTASRKAVS AAEKDLSNDQ SNNKSSRKAL LITFKGVKNI 1080
NAETLVQRLN DLDILYDAMP TSGYSNFQIP MHVRSVHGWS CQWGPREDSM LLSGICKHGF 1140
GAWLEIRDDP ELKMKDKIFL EDTKQTDNSV PKDKENKEKK VPSAVHLVRR GEYLLSALRE 1200
HHQNFGIKSS PAISTNGKTQ PKKQTANRRQ SGKPNVKSAQ KIESATRTPS PAISESRKKP 1260
SSKDTKIETP SREQSRSQTA SPVKSEKDDG NVSLNAEQKA RCKELMYPVR KHMKRLRKDS 1320
SGLGRAELVK LLTECLTTIG KHIEKTVNDT PSEEKATVRK NLWMFACYFW PKEEVKYTSL 1380
ISMYEKMK 1389
Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0347--Helicase
KW-0378--Hydrolase
KW-0547--Nucleotide-binding
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR000953--Chromo/shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR023779--Chromodomain_CS
IPR025260--DUF4208
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N

PROSITE

PS00598--CHROMO_1
PS50013--CHROMO_2
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00385--Chromo
PF13907--DUF4208
PF00271--Helicase_C
PF00176--SNF2_N

Gene Ontology

GO:0031934--C:mating-type region heterochromatin
GO:0000790--C:nuclear chromatin
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0004003--F:ATP-dependent DNA helicase activity
GO:0003677--F:DNA binding
GO:0006338--P:chromatin remodeling
GO:0030466--P:chromatin silencing at silent mating-type cassette
GO:0032508--P:DNA duplex unwinding
GO:0000070--P:mitotic sister chromatid segregation
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0060303--P:regulation of nucleosome density
GO:0006351--P:transcription, DNA-templated