dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0000515
Uniprot Accession O13845; RSD1_SCHPO;
Genbank Protein ID NP_594422.2;
Genbank Nucleotide ID NM_001019851.2;
Protein Name RNA-binding protein rsd1
Protein Synonyms/Alias
Gene Name rsd1
Gene Synonyms/Alias SPAC19G12.07c;
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast)
NCBI Taxa ID 284812
Functional Description
(View all)
Phosphorylation Sites
 dbPAF PTMs: 7
PositionPeptidesSourceReferences ( PMIDs )
74YESEGRLTPPPVSMGdbPTM 3.0;SysPTM 2.0;curated18257517; 16381945; 23193290; 19366988; 22817900
99FQREDSGYNDDVVTNcurated22817900
174SRHRYDDYSRSPPYSdbPTM 3.0;UniProt18257517; 16381945; 23193290
175RHRYDDYSRSPPYSScurated22817900
177RYDDYSRSPPYSSRHcurated22817900
465YREAAPLSPTEEESRdbPTM 3.0;UniProt;curated18257517; 16381945; 23193290; 22817900
475EEESRPITRDELMKKcurated22817900
Sequence
(Fasta)		MQLDAEALAE APFRKQEVPQ NQENQQKASS SFHESSLTSS THSHPSNPPP PPTRLHDRSF 60
KPVSKNYESE GRLTPPPVSM GYRYARSSKQ SFQREDSGYN DDVVTNSSSH RTPRHHRRSY 120
SPRSDYGSRS PSPHSSVDSH QSRSPVRSRD RDRSSRSSRS RHPSSRSRHR YDDYSRSPPY 180
SSRHSRSRRR YEERSSRSSR AHDYDYEDLR DDDRSHERKR SRSRPRERSS KLSEEERDRR 240
TVFVSQLANR LTSRELYDFF EQAGPVRDAQ IVRDKISGRS KGVAYVEFCH EDSVQAAIAL 300
SGKRLLGLPV IVQLTEAEKN RKAREAAELA RAASAEIPFH RLCVSNIHFN LTDEDVKAIF 360
EPFGDIEFVH LQRDDQNRSK GFGYIQYRNP ISARNALEKM NGFDLAGRNM RVCLGNDKFT 420
TETTSSMLKR FDETLARQER SQPSQRNGGS STYESQDYRE AAPLSPTEEE SRPITRDELM 480
KKLARSEDIS DNSKLVSEPE PPIRSRCALL ENMFNPAEET SPNWVQELEQ DVKEECDEKY 540
GKVVHIAVVP NELGQIFVKF ENADFAEKAI TGLHQRWFGG RTIKASILPE TDYYFKFPNA 600
KTA 604
Keyword

KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0694--RNA-binding
Interpro

IPR012677--Nucleotide-bd_a/b_plait
IPR029123--RBM39_linker
IPR006509--RBM39_SF
IPR000504--RRM_dom
PROSITE

PS50102--RRM
Pfam

PF15519--RBM39linker
PF00076--RRM_1
Gene Ontology

GO:0005634--C:nucleus
GO:0005681--C:spliceosomal complex
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:1990446--F:U1 snRNP binding
GO:0045292--P:mRNA cis splicing, via spliceosome