dbPAF Protein Information
| Tag | Content |
|---|---|
| dbPAF ID | dbPAF-0000514 |
| Uniprot Accession | O13838; NUP40_SCHPO; |
| Genbank Protein ID | NP_593304.1; |
| Genbank Nucleotide ID | NM_001018734.2; |
| Protein Name | Nucleoporin nup40 |
| Protein Synonyms/Alias | Nuclear pore protein nup40; |
| Gene Name | nup40 |
| Gene Synonyms/Alias | SPAC19E9.01c; |
| Organism | Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast) |
| NCBI Taxa ID | 284812 |
| Functional Description (View all) |
Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. Active directional transport is assured by both, a Phe-Gly (FG) repeat affinity gradient for these transport factors across the NPC and a transport cofactor concentration gradient across the nuclear envelope (GSP1 and GSP2 GTPases associated predominantly with GTP in the nucleus, with GDP in the cytoplasm). |
| Phosphorylation Sites |
dbPAF PTMs: 2 |
| Sequence (Fasta) | MSFGGSGSIT NRSTLKPLSV DDLRSPSPQK EYRGFRTSVS NIPQEKKFVP SHLSHFGSSQ 60 QRRFAPEVSS PLAEPYESSS SFRLSLSSPP SSKFGGPSFG TPKPFLHTNR LGTGSLIEDA 120 PPTQSIYDFS SSRQINALNV GQSSSPFSPV SEKVYDPSFT MSGAPQDSNT SVIVFGFPPE 180 LTNQVIAEFS RFGTIISENS LTASSAGFTP SKGPISGNWL QLTYAEPSSA AKAVLSNGML 240 INDSFMVGCI YSPAEAKEHV PKTLRNSNKD LEMTDASSSE TSMSIPVHAD AHFQSQSGLG 300 KKVIVQHKND IFKSSQKHQP RNWLFHYLFG FGSTEPIDEE EKSKTASDNT SLQTSLFGKI 360 VQVVLHTLFG F 372 |
| Keyword | KW-0181--Complete proteome |
| Interpro | IPR007846--RRM_NUP35_dom |
| PROSITE | PS51472--RRM_NUP35 |
| Pfam | PF05172--Nup35_RRM |
| Gene Ontology | GO:0005635--C:nuclear envelope |