dbPAF Protein Information
| Tag | Content | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| dbPAF ID | dbPAF-0000476 | ||||||||||||
| Uniprot Accession | O13710; SMC5_SCHPO; | ||||||||||||
| Genbank Protein ID | NP_594907.2; | ||||||||||||
| Genbank Nucleotide ID | NM_001020338.2; | ||||||||||||
| Protein Name | Structural maintenance of chromosomes protein 5 | ||||||||||||
| Protein Synonyms/Alias | DNA repair protein spr18;SMC partner of rad18; | ||||||||||||
| Gene Name | smc5 | ||||||||||||
| Gene Synonyms/Alias | spr18;SPAC14C4.02c; | ||||||||||||
| Organism | Schizosaccharomyces pombe (strain 972 / ATCC 24843)(Fission yeast) | ||||||||||||
| NCBI Taxa ID | 284812 | ||||||||||||
| Functional Description (View all) |
Acts in a DNA repair pathway for removal of UV-induced DNA damage that is distinct from classical nucleotide excision repair and in repair of ionizing radiation damage. Functions in homologous recombination repair of DNA double strand breaks and in recovery of stalled replication forks. Plays a critical role in meiosis. | ||||||||||||
| Phosphorylation Sites |
dbPAF PTMs: 2
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| Sequence (Fasta) | MDGLRPSKRR KSNPLYSDYA LGSIVRIKLV NFVTYDYCEL FPGPYLNLII GPNGTGKSTI 60 VSAICIGLGW PPKLLGRAKE AREFIKYGKN TATIEIEMKY RDDETVTITR QISQDKSSSF 120 SINREACATS SITSLMDTFN VQLNNLCHFL PQDRVAEFAQ LDPYSRLMET ERAIDHEGLL 180 PAHEKLIDLR KREREILQNK NQGQSTLNSL KDRQQALEKE VNIFKEREKI KSYIEMLGLA 240 KMLVIYREKT NVFNQLRADK KKLKKDLKDL VEEFQPILDK GEELRSDLKL KDDTFNDYSS 300 ASMELNTSNL RARASFSNFM ENEKKLYEKV NTNRTLLRNA NLTLNEAQQS VKSLTERQGP 360 RPSDNGVQDL QEKMQEVNAE KLQHENEKLE SSHELGSIRT LKAQKLIDLD NIKRELSYYN 420 DATKRKLDFM SSAPGWEDAY QTYQLLKEYE SAFEAPAYGP IYMNLKCKEK GFAALIEGFF 480 RTDTFRTFIM SNYNDYLKLM DLITSKTKYT PTIREFSSER KKKIEDFEPP CSREKLQSFG 540 FDGYVIDFLE GPEVVLVALC HMLKIHQIPI AKRELPPASV NALNNFRLAN GDPVLKTYLA 600 GSSIHLVFRS AYGDREITRR TDPLPSRSIY FSENVEMDLV KRKEEQLNAQ LSQLENLQNE 660 ERKLQEKVNE HESLLSRTND ILSTLRKERD EKLIPIHEWQ QLQERIEHQT LLLRQREKVP 720 EQFAAEIEKN EDIRKENFEA LMNSVLKVKE NSIKATNNFE KMLGSRLNVI EAKYKLEKHE 780 MDANQVNARL TEVQDRLKDI TDKLASARED AMSLYGSVVD SLQTQSSDRQ TAITELNEEF 840 ATSSEVDNKI SIEETKLKFM NVNSYVMEQY DARKKEIEEL ESKMSDFDQS VEELQDEMNS 900 IKEDWVSKLE ENVQCISDRF SKGMSGMGYA GEVRLGKSDD YDKWYIDILV QFREEEGLQK 960 LTGQRQSGGE RSVSTIMYLL SLQGLAIAPF RIVDEINQGM DPRNERVVHR HIVNSVCDNA 1020 VSQYFLVTPK LLPDLTYHRN LKVLCICNGA WLPATFRTSL STYFEKLKKS ALISSS 1077 |
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| Keyword | KW-0067--ATP-binding |
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| Interpro | |||||||||||||
| PROSITE | |||||||||||||
| Pfam | |||||||||||||
| Gene Ontology | GO:0000935--C:barrier septum |