dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0000398
Uniprot Accession O08919; NUMBL_MOUSE; Q4QQQ2; Q6NVG8;
Genbank Protein ID NP_035080.2;
Genbank Nucleotide ID NM_010950.2;
Protein Name Numb-like protein
Protein Synonyms/Alias
Gene Name Numbl
Gene Synonyms/Alias Nbl;
Organism Mus musculus(Mouse)
NCBI Taxa ID 10090
Functional Description
(View all)
Plays a role in the process of neurogenesis. Required throughout embryonic neurogenesis to maintain neural progenitor cells, also called radial glial cells (RGCs), by allowing their daughter cells to choose progenitor over neuronal cell fate. Not required for the proliferation of neural progenitor cells before the onset of embryonic neurogenesis. Also required postnatally in the subventricular zone (SVZ) neurogenesis by regulating SVZ neuroblasts survival and ependymal wall integrity. Negative regulator of NF-kappa-B signaling pathway. The inhibition of NF-kappa-B activation is mediated at least in part, by preventing MAP3K7IP2 to interact with polyubiquitin chains of TRAF6 and RIPK1 and by stimulating the 'Lys-48'-linked polyubiquitination and degradation of TRAF6 in cortical neurons.
Phosphorylation Sites
dbPAF PTMs: 19
PositionPeptidesSourceReferences ( PMIDs )
48TMNKLRQSLRRRKPAPhosphoSitePlus22135298
56LRRRKPAYVPEASRPPhosphoSitePlus22135298
61PAYVPEASRPHQWQAPhosphoSitePlus22135298
224TSFAREGSFRLSGGGPhosphoSitePlus;curated22135298; 25338131
228REGSFRLSGGGRPAEPhosphoSitePlus;curated22135298; 25338131
263PAQPGHVSPTPATTSdbPTM 3.0;Phospho.ELM 9.0;PHOSIDA;PhosphoPep 2.0;PhosphoSitePlus;SysPTM 2.0;curated17114649; 16381945; 23193290; 21183079; 21081558; 19060867;
265QPGHVSPTPATTSPGPhosphoPep 2.0;PhosphoSitePlus;curated19060867; 22135298; 23684622; 25521595; 20047950
268HVSPTPATTSPGEKGPhosphoPep 2.0;PhosphoSitePlus;curated19060867; 22135298; 23684622; 21183079; 22807455
269VSPTPATTSPGEKGEdbPTM 3.0;PhosphoPep 2.0;PhosphoSitePlus;curated21183079; 16381945; 23193290; 19060867; 22135298; 22807455;
270SPTPATTSPGEKGEAdbPTM 3.0;PhosphoPep 2.0;PhosphoSitePlus;curated21183079; 16381945; 23193290; 19060867; 22135298; 22817900;
279GEKGEAGTPVAAGTTdbPTM 3.0;Phospho.ELM 9.0;PhosphoSitePlus;SysPTM 2.0;curated17114649; 16381945; 23193290; 18056256; 22135298; 19366988;
285GTPVAAGTTAAAIPRdbPTM 3.0;PhosphoSitePlus;curated21183079; 16381945; 23193290; 22135298; 22817900
305EQLVRQGSFRGFPALPhosphoSitePlus;curated22135298; 22817900; 23984901
313FRGFPALSQKNSPFKPhosphoSitePlus22135298
317PALSQKNSPFKRQLSPhosphoSitePlus22135298
324SPFKRQLSLRLNELPPhosphoSitePlus;curated22135298; 22817900; 23984901
409FQPGHKRTPSEAERWdbPTM 3.0;PHOSIDA;PhosphoSitePlus;curated20415495; 16381945; 23193290; 21081558; 22135298; 22817900;
411PGHKRTPSEAERWLEdbPTM 3.0;PHOSIDA;PhosphoPep 2.0;PhosphoSitePlus;UniProt;curated19367708; 20415495; 21183079; 16381945; 23193290; 21081558;
421ERWLEEVSQVAKAQQcurated25266776
Sequence
(Fasta)
MSRSAAASGG PRRPDQHLSP APCGASGPPE TFRTESDGAG TMNKLRQSLR RRKPAYVPEA 60
SRPHQWQADE DAVRKGTCSF PVRYLGHVEV EESRGMHVCE DAVKKLKAMG RKSVKSVLWV 120
SADGLRVVDD KTKDLLVDQT IEKVSFCAPD RNLDKAFSYI CRDGTTRRWI CHCFLALKDS 180
GERLSHAVGC AFAACLERKQ RREKECGVTA AFDASRTSFA REGSFRLSGG GRPAEREAGD 240
KKKAEAAAAP AVAPGPAQPG HVSPTPATTS PGEKGEAGTP VAAGTTAAAI PRRHAPLEQL 300
VRQGSFRGFP ALSQKNSPFK RQLSLRLNEL PSTLQRRTDF QVKGTVPEME PPGTGDSDGI 360
NALCTQISSS FASAGAPASG PPPATTGTSA WGEPSVPAAA AFQPGHKRTP SEAERWLEEV 420
SQVAKAQQQQ QQQQQQQQQQ QATSVPPMPT MAPTLQPFSA PVGPFDTAAA QVAVFLPPTH 480
MQPPFVPAYP GLGYPPMPRV PVVGITPSQM VANAFCSAAQ LQPQPATLLG KAGAFPPPAA 540
PSAPGGQARP RPNGAPWPPE PAPAPAPELD PFEAQWAALE GKPAVEKPSN PFSGDLQKTF 600
EIEL 605
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0217--Developmental protein
KW-0524--Neurogenesis
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR016698--Numb/numb-like
IPR010449--Numb_domain
IPR011993--PH/PTB_dom
IPR006020--PTB/PI_dom

PROSITE

PS01179--PID

Pfam

PF06311--NumbF
PF00640--PID

Gene Ontology

GO:0005737--C:cytoplasm
GO:0034332--P:adherens junction organization
GO:0007409--P:axonogenesis
GO:0019221--P:cytokine-mediated signaling pathway
GO:0030900--P:forebrain development
GO:0021670--P:lateral ventricle development
GO:0007399--P:nervous system development
GO:0021849--P:neuroblast division in subventricular zone
GO:0007405--P:neuroblast proliferation
GO:0050769--P:positive regulation of neurogenesis
GO:0019538--P:protein metabolic process