dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0000357
Uniprot Accession O08775; VGFR2_RAT;
Genbank Protein ID NP_037194.1;
Genbank Nucleotide ID NM_013062.1;
Protein Name Vascular endothelial growth factor receptor 2
Protein Synonyms/Alias
Gene Name Kdr
Gene Synonyms/Alias Flk1;
Organism Rattus norvegicus(Rat)
NCBI Taxa ID 10116
Functional Description
(View all)
Tyrosine-protein kinase that acts as a cell-surface receptor for VEGFA, VEGFC and VEGFD. Plays an essential role in the regulation of angiogenesis, vascular development, vascular permeability, and embryonic hematopoiesis. Promotes proliferation, survival, migration and differentiation of endothelial cells. Promotes reorganization of the actin cytoskeleton. Isoforms lacking a transmembrane domain may function as decoy receptors for VEGFA, VEGFC and/or VEGFD. Modulates FLT1 and FLT4 signaling by forming heterodimers. Binding of vascular growth factors to isoform 1 leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol-1,4,5-trisphosphate and the activation of protein kinase C. Mediates activation of MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. Mediates phosphorylation of PIK3R1, the regulatory subunit of phosphatidylinositol 3-kinase, reorganization of the actin cytoskeleton and activation of PTK2/FAK1. Required for VEGFA-mediated induction of NOS2 and NOS3, leading to the production of the signaling molecule nitric oxide (NO) by endothelial cells. Phosphorylates PLCG1. Promotes phosphorylation of FYN, NCK1, NOS3, PIK3R1, PTK2/FAK1 and SRC (By similarity).
Phosphorylation Sites
dbPAF PTMs: 7
PositionPeptidesSourceReferences ( PMIDs )
797EGELKTGYLSIVMDPPhosphoSitePlus22135298
978SGFVEEKSLSDVEEEPhosphoSitePlus;UniProt22135298; 22673903
980FVEEKSLSDVEEEEAPhosphoSitePlus;UniProt22135298; 22673903
1050FGLARDIYKDPDYVRPhosphoSitePlus22135298
1055DIYKDPDYVRKGDPRPhosphoSitePlus22135298
1171AQQDGKDYIVLPMSEdbPTM 3.0;PhosphoSitePlus11387210; 16381945; 23193290; 22135298
1210VCDPKFHYDNTAGISPhosphoSitePlus22135298
Sequence
(Fasta)
MESRALLAVA LWFCVETRAA SVGLPGDSLH PPKLSTQKDI LTILANTTLQ ITCRGQRDLD 60
WLWPNTPRDS EERVLVTECG DSIFCKTLTV PRVVGNDTGA YKCFYRDTDV SSIVYVYVQD 120
HRSPFIASVS DEHGIVYITE NKNKTVVIPC RGSISNLNVS LCARYPEKRF VPDGNRISWD 180
SEKGFTIPSY MISYAGMVFC EAKINDETYQ SIMYIVLVVG YRIYDVVLSP PHEIELSAGE 240
KLVLNCTART ELNVGLDFSW QFPSSKHQHK KIVNRDVKSL PGTVAKMFLS TLTIDSVTKS 300
DQGEYTCTAY SGLMTKKNKT FVRVHTKPFI AFGSGMKSLV EATVGSQVRI PVKYLSYPAP 360
DIKWYRNGRP IESNYTMIVG DELTIMEVSE RDAGNYTVIL TNPISMEKQS HMVSLVVNVP 420
PQIGEKALIS PMDSYQYGTM QTLTCTVYAN PPLHHIQWYW QLEEACSYRP SQTNPYTCKE 480
WRHVKDFQGG NKIEVTKNQY ALIEGKNKTV STLVIQAAYV SALYKCEAIN KAGRGERVIS 540
FHVIRGPEIT VQPATQPTER ESMSLLCTAD RNTFENLTWY KLGSQATSVH MGESLTPVCK 600
NLDALWKLNG TVFSNSTNDI LIVAFQNASL QDQGNYVCSA QDKKTKKRHC LVKQLVILER 660
MAPMITGNLE NQTTTIGETI EVVCPTSGNP TPLITWFKDN ETLVEDSGIV LKDGNRNLTI 720
RRVRKEDGGL YTCQACNVLG CARAETLFII EGVQEKTNLE VIILVGTAVI AMFFWLLLVI 780
LVRTVKRANE GELKTGYLSI VMDPDELPLD ERCERLPYDA SKWEFPRDRL KLGKPLGRGA 840
FGQVIEADAF GIDKTATCKT VAVKMLKEGA THSEHRALMS ELKILIHIGH HLNVVNLLGA 900
CTKPGGPLMV IVEFCKFGNL STYLRGKRNE FVPYKSKGAR FRSGKDYVGE LSVDLKRRLD 960
SITSSQSSAS SGFVEEKSLS DVEEEEASEE LYKDFLTLEH LICYSFQVAK GMEFLASRKC 1020
IHRDLAARNI LLSEKNVVKI CDFGLARDIY KDPDYVRKGD PRLPLKWMAP ETIFDRIYTI 1080
QSGVWSFGVL LWEIFSLGAS PYPGVKIDEK FCRRLKEGTR MRAPDYTTPE MYQTMLDCWH 1140
EDPNQRPAFS ELVEHLGNLL QANAQQDGKD YIVLPMSETL SMEEDSGLSL PTSPVSCMEE 1200
EEVCDPKFHY DNTAGISHYL QNSKRKSRPV SVKTFEDIPL EEPEVKVIPD DSQTDSGMVL 1260
ASEELKTLED RNKLSPSFGG MMPSKSRESV ASEGSNQTSG YQSGYHSDDT DTTVYSSDEA 1320
GLLKLVDVAG HVDSGTTLRS SPV 1344
Keyword

KW-0037--Angiogenesis
KW-0067--ATP-binding
KW-0965--Cell junction
KW-1003--Cell membrane
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0217--Developmental protein
KW-0221--Differentiation
KW-0903--Direct protein sequencing
KW-1015--Disulfide bond
KW-0256--Endoplasmic reticulum
KW-0967--Endosome
KW-0325--Glycoprotein
KW-0393--Immunoglobulin domain
KW-0418--Kinase
KW-0472--Membrane
KW-0547--Nucleotide-binding
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-0675--Receptor
KW-1185--Reference proteome
KW-0677--Repeat
KW-0732--Signal
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0829--Tyrosine-protein kinase
KW-0832--Ubl conjugation

Interpro

IPR007110--Ig-like_dom
IPR013783--Ig-like_fold
IPR013098--Ig_I-set
IPR003599--Ig_sub
IPR003598--Ig_sub2
IPR013151--Immunoglobulin
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR017441--Protein_kinase_ATP_BS
IPR001245--Ser-Thr/Tyr_kinase_cat_dom
IPR008266--Tyr_kinase_AS
IPR020635--Tyr_kinase_cat_dom
IPR001824--Tyr_kinase_rcpt_3_CS
IPR009136--VEGFR2_rcpt

PROSITE

PS50835--IG_LIKE
PS00107--PROTEIN_KINASE_ATP
PS50011--PROTEIN_KINASE_DOM
PS00109--PROTEIN_KINASE_TYR
PS00240--RECEPTOR_TYR_KIN_III

Pfam

PF07679--I-set
PF00047--ig
PF07714--Pkinase_Tyr

Gene Ontology

GO:0030054--C:cell junction
GO:0005737--C:cytoplasm
GO:0016023--C:cytoplasmic membrane-bounded vesicle
GO:0005829--C:cytosol
GO:0005769--C:early endosome
GO:0005783--C:endoplasmic reticulum
GO:0005887--C:integral component of plasma membrane
GO:0043005--C:neuron projection
GO:0043025--C:neuronal cell body
GO:0005634--C:nucleus
GO:0005886--C:plasma membrane
GO:0005524--F:ATP binding
GO:0019838--F:growth factor binding
GO:0005021--F:vascular endothelial growth factor-activated receptor activity
GO:0007568--P:aging
GO:0001525--P:angiogenesis
GO:0035584--P:calcium-mediated signaling using intracellular calcium source
GO:0035924--P:cellular response to vascular endothelial growth factor stimulus
GO:0035162--P:embryonic hemopoiesis
GO:0003416--P:endochondral bone growth
GO:0003158--P:endothelium development
GO:0030212--P:hyaluronan metabolic process
GO:0008584--P:male gonad development
GO:0043066--P:negative regulation of apoptotic process
GO:2000352--P:negative regulation of endothelial cell apoptotic process
GO:0043524--P:negative regulation of neuron apoptotic process
GO:0048812--P:neuron projection morphogenesis
GO:0018108--P:peptidyl-tyrosine phosphorylation
GO:0045766--P:positive regulation of angiogenesis
GO:0050850--P:positive regulation of calcium-mediated signaling
GO:0030335--P:positive regulation of cell migration
GO:0008284--P:positive regulation of cell proliferation
GO:0007204--P:positive regulation of cytosolic calcium ion concentration
GO:0001938--P:positive regulation of endothelial cell proliferation
GO:0070374--P:positive regulation of ERK1 and ERK2 cascade
GO:0048170--P:positive regulation of long-term neuronal synaptic plasticity
GO:0043410--P:positive regulation of MAPK cascade
GO:0050769--P:positive regulation of neurogenesis
GO:0051770--P:positive regulation of nitric-oxide synthase biosynthetic process
GO:0014068--P:positive regulation of phosphatidylinositol 3-kinase signaling
GO:0001934--P:positive regulation of protein phosphorylation
GO:0032008--P:positive regulation of TOR signaling
GO:2001214--P:positive regulation of vasculogenesis
GO:0045909--P:positive regulation of vasodilation
GO:0046777--P:protein autophosphorylation
GO:0042493--P:response to drug
GO:0001666--P:response to hypoxia
GO:0070482--P:response to oxygen levels
GO:0048010--P:vascular endothelial growth factor receptor signaling pathway
GO:0038084--P:vascular endothelial growth factor signaling pathway
GO:0001570--P:vasculogenesis