dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0000341
Uniprot Accession O08722; UNC5B_RAT;
Genbank Protein ID NP_071543.1;
Genbank Nucleotide ID NM_022207.1;
Protein Name Netrin receptor UNC5B
Protein Synonyms/Alias Protein unc-5 homolog 2;Protein unc-5 homolog B;
Gene Name Unc5b
Gene Synonyms/Alias Unc5h2;
Organism Rattus norvegicus(Rat)
NCBI Taxa ID 10116
Functional Description
(View all)
Receptor for netrin required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding. Axon repulsion in growth cones may be caused by its association with DCC that may trigger signaling for repulsion (PubMed:10399920, PubMed:9126742). Functions as netrin receptor that negatively regulates vascular branching during angiogenesis. Mediates retraction of tip cell filopodia on endothelial growth cones in response to netrin (By similarity). It also acts as a dependence receptor required for apoptosis induction when not associated with netrin ligand (PubMed:11387206). Mediates apoptosis by activating DAPK1 (PubMed:18582460). In the absence of NTN1, activates DAPK1 by reducing its autoinhibitory phosphorylation at Ser-308 thereby increasing its catalytic activity (PubMed:15729359).
Phosphorylation Sites
dbPAF PTMs: 2
PositionPeptidesSourceReferences ( PMIDs )
528FLHLRSASLGSQHLLPhosphoSitePlus;curated22135298; 23984901
531LRSASLGSQHLLGLPPhosphoSitePlus22135298
Sequence
(Fasta)
MRARSGARGA LLLALLLCWD PTPSLAGIDS GGQALPDSFP SAPAEQLPHF LLEPEDAYIV 60
KNKPVELHCR AFPATQIYFK CNGEWVSQKG HVTQESLDEA TGLRIREVQI EVSRQQVEEL 120
FGLEDYWCQC VAWSSSGTTK SRRAYIRIAY LRKNFDQEPL AKEVPLDHEV LLQCRPPEGV 180
PVAEVEWLKN EDVIDPAQDT NFLLTIDHNL IIRQARLSDT ANYTCVAKNI VAKRRSTTAT 240
VIVYVNGGWS SWAEWSPCSN RCGRGWQKRT RTCTNPAPLN GGAFCEGQAC QKTACTTVCP 300
VDGAWTEWSK WSACSTECAH WRSRECMAPP PQNGGRDCSG TLLDSKNCTD GLCVLNQRTL 360
NDPKSRPLEP SGDVALYAGL VVAVFVVLAV LMAVGVIVYR RNCRDFDTDI TDSSAALTGG 420
FHPVNFKTAR PSNPQLLHPS APPDLTASAG IYRGPVYALQ DSADKIPMTN SPLLDPLPSL 480
KIKVYDSSTI GSGAGLADGA DLLGVLPPGT YPGDFSRDTH FLHLRSASLG SQHLLGLPRD 540
PSSSVSGTFG CLGGRLTIPG TGVSLLVPNG AIPQGKFYDL YLRINKTEST LPLSEGSQTV 600
LSPSVTCGPT GLLLCRPVVL TVPHCAEVIA GDWIFQLKTQ AHQGHWEEVV TLDEETLNTP 660
CYCQLEAKSC HILLDQLGTY VFTGESYSRS AVKRLQLAIF APALCTSLEY SLRVYCLEDT 720
PAALKEVLEL ERTLGGYLVE EPKTLLFKDS YHNLRLSLHD IPHAHWRSKL LAKYQEIPFY 780
HVWNGSQKAL HCTFTLERHS LASTEFTCKV CVRQVEGEGQ IFQLHTTLAE TPAGSLDALC 840
SAPGNAATTQ LGPYAFKIPL SIRQKICNSL DAPNSRGNDW RLLAQKLSMD RYLNYFATKA 900
SPTGVILDLW EARQQDDGDL NSLASALEEM GKSEMLVAMT TDGDC 946
Keyword

KW-0002--3D-structure
KW-0053--Apoptosis
KW-1003--Cell membrane
KW-0181--Complete proteome
KW-0217--Developmental protein
KW-1015--Disulfide bond
KW-0325--Glycoprotein
KW-0393--Immunoglobulin domain
KW-0449--Lipoprotein
KW-0472--Membrane
KW-0564--Palmitate
KW-0675--Receptor
KW-1185--Reference proteome
KW-0677--Repeat
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR011029--DEATH-like_dom
IPR000488--Death_domain
IPR007110--Ig-like_dom
IPR013783--Ig-like_fold
IPR013098--Ig_I-set
IPR003598--Ig_sub2
IPR000884--TSP1_rpt
IPR000906--ZU5_dom

PROSITE

PS50017--DEATH_DOMAIN
PS50835--IG_LIKE
PS50092--TSP1
PS51145--ZU5

Pfam

PF00531--Death
PF07679--I-set
PF00090--TSP_1
PF00791--ZU5

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0045121--C:membrane raft
GO:0005886--C:plasma membrane
GO:0005042--F:netrin receptor activity
GO:0006915--P:apoptotic process
GO:0007411--P:axon guidance
GO:0038007--P:netrin-activated signaling pathway
GO:2001241--P:positive regulation of extrinsic apoptotic signaling pathway in absence of ligand